Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03349 and BSU22500

See DNA alignment / Visit BSNT_03349 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_03349___ypjD.1.22522.seq
#    -bsequence pep-align/BSU22500___ypjD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03349___ypjD-BSU22500___ypjD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03349___ypjD-BSU22500___ypjD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03349___ypjD
# 2: BSU22500___ypjD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 111
# Identity:     110/111 (99.1%)
# Similarity:   111/111 (100.0%)
# Gaps:           0/111 ( 0.0%)
# Score: 573.0
# 
#
#=======================================

BSNT_03349___      1 MSDKTMKDIQAEVDRYIGQFKEGYFSPLAMMARLTEELGELAREVNHRYG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22500___yp      1 MSDKTMKDIQAEVDRYIGQFKEGYFSPLAMMARLTEELGELAREVNHRYG     50

BSNT_03349___     51 EKPKKATEDDKSMEEEMGDVLFVLVCLANSLDISLEEAHDRVMHKFNTRD    100
                     ||||||||||||||||:|||||||||||||||||||||||||||||||||
BSU22500___yp     51 EKPKKATEDDKSMEEEIGDVLFVLVCLANSLDISLEEAHDRVMHKFNTRD    100

BSNT_03349___    101 KDRWTRKEEGK    111
                     |||||||||||
BSU22500___yp    101 KDRWTRKEEGK    111


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