Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03349 and BSU22500

See Amino acid alignment / Visit BSNT_03349 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence dna-align/BSNT_03349___ypjD.1.22522.seq
#    -bsequence dna-align/BSU22500___ypjD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03349___ypjD-BSU22500___ypjD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03349___ypjD-BSU22500___ypjD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03349___ypjD
# 2: BSU22500___ypjD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity:     333/336 (99.1%)
# Similarity:   333/336 (99.1%)
# Gaps:           0/336 ( 0.0%)
# Score: 1653.0
# 
#
#=======================================

BSNT_03349___      1 GTGAGTGATAAAACAATGAAAGACATACAGGCTGAAGTAGACCGTTACAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22500___yp      1 GTGAGTGATAAAACAATGAAAGACATACAGGCTGAAGTAGACCGTTACAT     50

BSNT_03349___     51 CGGCCAATTTAAAGAAGGATATTTTAGCCCGCTGGCCATGATGGCGAGGC    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU22500___yp     51 AGGCCAATTTAAAGAAGGATATTTTAGCCCGCTGGCCATGATGGCGAGGC    100

BSNT_03349___    101 TGACTGAAGAACTGGGCGAGCTCGCCAGAGAAGTGAATCACCGTTATGGA    150
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU22500___yp    101 TGACTGAAGAACTGGGCGAGCTTGCCAGAGAAGTGAATCACCGTTATGGA    150

BSNT_03349___    151 GAAAAACCAAAAAAAGCGACTGAAGATGATAAAAGCATGGAAGAGGAAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22500___yp    151 GAAAAACCAAAAAAAGCGACTGAAGATGATAAAAGCATGGAAGAGGAAAT    200

BSNT_03349___    201 GGGCGATGTGCTATTTGTATTGGTTTGTTTAGCCAACTCTCTTGATATCT    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU22500___yp    201 AGGCGATGTGCTATTTGTATTGGTTTGTTTAGCCAACTCTCTTGATATCT    250

BSNT_03349___    251 CTTTAGAGGAAGCTCACGACCGAGTCATGCATAAATTTAATACAAGAGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22500___yp    251 CTTTAGAGGAAGCTCACGACCGAGTCATGCATAAATTTAATACAAGAGAT    300

BSNT_03349___    301 AAAGATCGCTGGACCAGAAAAGAAGAAGGAAAGTAG    336
                     ||||||||||||||||||||||||||||||||||||
BSU22500___yp    301 AAAGATCGCTGGACCAGAAAAGAAGAAGGAAAGTAG    336


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.