Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03295 and BSU22120

See DNA alignment / Visit BSNT_03295 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence pep-align/BSNT_03295___kdgR.1.22522.seq
#    -bsequence pep-align/BSU22120___kdgR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03295___kdgR-BSU22120___kdgR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03295___kdgR-BSU22120___kdgR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03295___kdgR
# 2: BSU22120___kdgR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     337/339 (99.4%)
# Similarity:   338/339 (99.7%)
# Gaps:           0/339 ( 0.0%)
# Score: 1700.0
# 
#
#=======================================

BSNT_03295___      1 MKKKTTGHTTIKDVAECAGVSKSTVSRYINGKIDAISPEKVKNIKKAIAE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd      1 MKKKTTGHTTIKDVAECAGVSKSTVSRYINGKIDAISPEKVKNIKKAIAE     50

BSNT_03295___     51 LNYRPSKMAQGLKIKKSKLIGFVVADITNPFSVAAFRGVEEVCDQYGYSI    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd     51 LNYRPSKMAQGLKIKKSKLIGFVVADITNPFSVAAFRGVEEVCDQYGYSI    100

BSNT_03295___    101 MVCNTDNSPEKEREMLLKLEAHSVEGLILNATGENKDVLRAFAEQQIPTI    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    101 MVCNTDNSPEKEREMLLKLEAHSVEGLILNATGENKDVLRAFAEQQIPTI    150

BSNT_03295___    151 LIDRKLPDLKLDTVTTDNRWITKEILQKVYSKGYTDVALFTEPISSISPR    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    151 LIDRKLPDLKLDTVTTDNRWITKEILQKVYSKGYTDVALFTEPISSISPR    200

BSNT_03295___    201 AERAAVYQEMASVQNVNGLVRLHEIDVKDKEQLKAALRSFHKEMPEQKKA    250
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU22120___kd    201 AERAAVYQEMASVQNVNGLVRLHEIDVKDKEQLKAELRSFHKEMPEQKKA    250

BSNT_03295___    251 ILALNGLIMLKIISCMEELGLRIPQDIGIAGFDDTEWYKLIGPGITTIAQ    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    251 ILALNGLIMLKIISCMEELGLRIPQDIGIAGFDDTEWYKLIGPGITTIAQ    300

BSNT_03295___    301 PSHDMGRTAMERVLKRIDGDKGAPQTIELEAKVIMRKSL    339
                     |||||||||||||||||:|||||||||||||||||||||
BSU22120___kd    301 PSHDMGRTAMERVLKRIEGDKGAPQTIELEAKVIMRKSL    339


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