Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03295 and BSU22120

See Amino acid alignment / Visit BSNT_03295 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence dna-align/BSNT_03295___kdgR.1.22522.seq
#    -bsequence dna-align/BSU22120___kdgR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03295___kdgR-BSU22120___kdgR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03295___kdgR-BSU22120___kdgR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03295___kdgR
# 2: BSU22120___kdgR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1020
# Identity:    1013/1020 (99.3%)
# Similarity:  1013/1020 (99.3%)
# Gaps:           0/1020 ( 0.0%)
# Score: 5037.0
# 
#
#=======================================

BSNT_03295___      1 ATGAAAAAGAAAACAACAGGCCATACAACCATCAAAGATGTAGCTGAATG     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU22120___kd      1 ATGAAAAAGAAAACAACAGGCCATACAACCATCAAAGACGTAGCTGAATG     50

BSNT_03295___     51 TGCAGGAGTTTCGAAATCGACAGTTTCCCGCTATATTAACGGAAAAATTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd     51 TGCAGGAGTTTCGAAATCGACAGTTTCCCGCTATATTAACGGAAAAATTG    100

BSNT_03295___    101 ACGCGATTTCTCCTGAAAAAGTGAAAAACATTAAAAAGGCAATCGCAGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    101 ACGCGATTTCTCCTGAAAAAGTGAAAAACATTAAAAAGGCAATCGCAGAA    150

BSNT_03295___    151 TTGAATTATCGGCCGAGTAAAATGGCACAAGGTTTGAAAATAAAAAAAAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    151 TTGAATTATCGGCCGAGTAAAATGGCACAAGGTTTGAAAATAAAAAAAAG    200

BSNT_03295___    201 CAAGTTAATCGGATTTGTTGTGGCTGACATTACAAATCCTTTTTCGGTCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    201 CAAGTTAATCGGATTTGTTGTGGCTGACATTACAAATCCTTTTTCGGTCG    250

BSNT_03295___    251 CTGCTTTCAGGGGAGTCGAAGAGGTTTGTGATCAATATGGATACAGCATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    251 CTGCTTTCAGGGGAGTCGAAGAGGTTTGTGATCAATATGGATACAGCATT    300

BSNT_03295___    301 ATGGTGTGCAACACAGATAACAGTCCTGAAAAAGAGCGGGAAATGCTCTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    301 ATGGTGTGCAACACAGATAACAGTCCTGAAAAAGAGCGGGAAATGCTCTT    350

BSNT_03295___    351 AAAGCTAGAAGCCCATTCGGTTGAGGGCTTGATTTTAAACGCAACGGGGG    400
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU22120___kd    351 AAAGCTAGAAGCCCATTCGGTTGAGGGCTTGATTTTAAACGCAACAGGGG    400

BSNT_03295___    401 AAAACAAGGATGTACTGCGCGCTTTTGCTGAACAGCAAATTCCAACAATC    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU22120___kd    401 AAAACAAGGATGTACTCCGCGCTTTTGCTGAACAGCAAATTCCAACAATC    450

BSNT_03295___    451 TTAATTGACCGGAAACTGCCGGATCTGAAACTGGATACCGTAACGACTGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    451 TTAATTGACCGGAAACTGCCGGATCTGAAACTGGATACCGTAACGACTGA    500

BSNT_03295___    501 CAACAGATGGATCACAAAAGAGATTCTTCAGAAGGTTTACAGCAAAGGGT    550
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU22120___kd    501 CAACAGATGGATCACAAAAGAGATTCTTCAGAAGGTGTACAGCAAAGGGT    550

BSNT_03295___    551 ATACTGATGTCGCGCTGTTTACCGAACCGATTTCCTCTATCAGCCCTCGT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    551 ATACTGATGTCGCGCTGTTTACCGAACCGATTTCCTCTATCAGCCCTCGT    600

BSNT_03295___    601 GCAGAAAGAGCAGCTGTGTATCAGGAAATGGCTTCCGTTCAAAATGTGAA    650
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU22120___kd    601 GCAGAAAGAGCAGCTGTGTATCAGGAAATGGCTTCGGTTCAAAATGTGAA    650

BSNT_03295___    651 CGGGCTTGTCAGATTGCATGAAATTGACGTAAAGGACAAGGAGCAGCTTA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    651 CGGGCTTGTCAGATTGCATGAAATTGACGTAAAGGACAAGGAGCAGCTTA    700

BSNT_03295___    701 AGGCGGCGCTTCGTTCTTTTCACAAGGAAATGCCGGAGCAAAAAAAAGCG    750
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    701 AGGCGGAGCTTCGTTCTTTTCACAAGGAAATGCCGGAGCAAAAAAAAGCG    750

BSNT_03295___    751 ATTCTGGCTTTGAATGGCTTGATTATGCTGAAAATCATCAGCTGTATGGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    751 ATTCTGGCTTTGAATGGCTTGATTATGCTGAAAATCATCAGCTGTATGGA    800

BSNT_03295___    801 AGAGCTTGGCCTGCGCATCCCTCAAGATATAGGGATTGCAGGATTCGATG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    801 AGAGCTTGGCCTGCGCATCCCTCAAGATATAGGGATTGCAGGATTCGATG    850

BSNT_03295___    851 ATACGGAGTGGTACAAACTGATCGGTCCAGGCATTACAACGATCGCCCAG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    851 ATACGGAGTGGTACAAACTGATCGGTCCAGGCATTACAACGATCGCCCAG    900

BSNT_03295___    901 CCGTCACATGATATGGGCAGGACGGCGATGGAACGTGTATTAAAAAGGAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    901 CCGTCACATGATATGGGCAGGACGGCGATGGAACGTGTATTAAAAAGGAT    950

BSNT_03295___    951 TGATGGTGACAAAGGAGCGCCTCAAACCATTGAATTAGAGGCAAAAGTCA   1000
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU22120___kd    951 TGAAGGTGACAAAGGAGCGCCTCAAACCATTGAATTAGAGGCAAAAGTCA   1000

BSNT_03295___   1001 TCATGAGAAAGTCACTTTAA   1020
                     ||||||||||||||||||||
BSU22120___kd   1001 TCATGAGAAAGTCACTTTAA   1020


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03295 and BSU22120

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
