Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_03242 and BSU21740

See DNA alignment / Visit BSNT_03242 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence pep-align/BSNT_03242___ypmR.1.22522.seq
#    -bsequence pep-align/BSU21740___ypmR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03242___ypmR-BSU21740___ypmR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03242___ypmR-BSU21740___ypmR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03242___ypmR
# 2: BSU21740___ypmR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     255/255 (100.0%)
# Similarity:   255/255 (100.0%)
# Gaps:           0/255 ( 0.0%)
# Score: 1299.0
# 
#
#=======================================

BSNT_03242___      1 MKLRIFSIMASLILLLTACTSIRTSSEGKQKAHETKTKEHIVIAAVGDSL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp      1 MKLRIFSIMASLILLLTACTSIRTSSEGKQKAHETKTKEHIVIAAVGDSL     50

BSNT_03242___     51 TEGVGDPDGKGYVGKVADSIRSDKQVKTVDVKNYAVKGNRSDDLLEKLKD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp     51 TEGVGDPDGKGYVGKVADSIRSDKQVKTVDVKNYAVKGNRSDDLLEKLKD    100

BSNT_03242___    101 KKVQKGIKDADYVFFTIGGNDLMKILRQNFLQLTVEPFQEAEKPYEKRFE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    101 KKVQKGIKDADYVFFTIGGNDLMKILRQNFLQLTVEPFQEAEKPYEKRFE    150

BSNT_03242___    151 KIISEIRELNDHAELIYVSMYNPFTFTLSELNEINGVVTDWNHIAEKELK    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    151 KIISEIRELNDHAELIYVSMYNPFTFTLSELNEINGVVTDWNHIAEKELK    200

BSNT_03242___    201 KDKHAKIVHIEDLFNQKSDSSRISEEDDFHPNGTGYSLIAKRVYQAIKKE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    201 KDKHAKIVHIEDLFNQKSDSSRISEEDDFHPNGTGYSLIAKRVYQAIKKE    250

BSNT_03242___    251 GLPKE    255
                     |||||
BSU21740___yp    251 GLPKE    255


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.