Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03242 and BSU21740

See Amino acid alignment / Visit BSNT_03242 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence dna-align/BSNT_03242___ypmR.1.22522.seq
#    -bsequence dna-align/BSU21740___ypmR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03242___ypmR-BSU21740___ypmR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03242___ypmR-BSU21740___ypmR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03242___ypmR
# 2: BSU21740___ypmR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     764/768 (99.5%)
# Similarity:   764/768 (99.5%)
# Gaps:           0/768 ( 0.0%)
# Score: 3804.0
# 
#
#=======================================

BSNT_03242___      1 TTGAAGCTGCGCATTTTTTCAATCATGGCCAGTTTGATTTTGCTTCTTAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp      1 TTGAAGCTGCGCATTTTTTCAATCATGGCCAGTTTGATTTTGCTTCTTAC     50

BSNT_03242___     51 TGCGTGTACGAGCATACGTACATCATCTGAGGGAAAACAAAAAGCCCATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp     51 TGCGTGTACGAGCATACGTACATCATCTGAGGGAAAACAAAAAGCCCATG    100

BSNT_03242___    101 AAACGAAAACAAAAGAACACATTGTCATAGCGGCTGTCGGAGATTCGCTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    101 AAACGAAAACAAAAGAACACATTGTCATAGCGGCTGTCGGAGATTCGCTG    150

BSNT_03242___    151 ACAGAAGGAGTCGGAGATCCCGACGGAAAGGGATATGTCGGCAAGGTGGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    151 ACAGAAGGAGTCGGAGATCCCGACGGAAAGGGATATGTCGGCAAGGTGGC    200

BSNT_03242___    201 GGATTCTATCCGGTCAGATAAACAAGTCAAAACGGTCGACGTGAAAAATT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    201 GGATTCTATCCGGTCAGATAAACAAGTCAAAACGGTCGACGTGAAAAATT    250

BSNT_03242___    251 ATGCCGTAAAAGGGAACCGTTCGGATGATTTATTAGAAAAACTAAAAGAT    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    251 ATGCTGTAAAAGGGAACCGTTCGGATGATTTATTAGAAAAACTAAAAGAT    300

BSNT_03242___    301 AAAAAGGTTCAAAAAGGCATAAAGGACGCAGATTATGTCTTTTTTACAAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    301 AAAAAGGTTCAAAAAGGCATAAAGGACGCAGATTATGTCTTTTTTACAAT    350

BSNT_03242___    351 TGGCGGTAATGATTTGATGAAAATCCTTCGCCAAAACTTTCTGCAATTAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    351 TGGCGGTAATGATTTGATGAAAATCCTTCGCCAAAACTTTCTGCAATTAA    400

BSNT_03242___    401 CAGTTGAACCGTTTCAGGAAGCGGAAAAACCGTACGAAAAGCGCTTTGAA    450
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    401 CCGTTGAACCGTTTCAGGAAGCGGAAAAACCGTACGAAAAGCGCTTTGAA    450

BSNT_03242___    451 AAAATCATTTCTGAAATTCGCGAGCTGAATGATCACGCTGAGCTGATTTA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    451 AAAATCATTTCTGAAATTCGCGAGCTGAATGATCACGCTGAGCTGATTTA    500

BSNT_03242___    501 TGTCAGCATGTACAATCCGTTTACGTTTACATTATCAGAACTAAATGAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    501 TGTCAGCATGTACAATCCGTTTACGTTTACATTATCAGAACTAAATGAAA    550

BSNT_03242___    551 TAAATGGTGTCGTCACGGATTGGAACCATATTGCTGAAAAAGAGCTGAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    551 TAAATGGTGTCGTCACGGATTGGAACCATATTGCTGAAAAAGAGCTGAAA    600

BSNT_03242___    601 AAAGATAAACATGCAAAAATCGTTCATATCGAAGATTTGTTCAATCAAAA    650
                     |||||||||||||||||||||||.|||||||||||||||||.||||||||
BSU21740___yp    601 AAAGATAAACATGCAAAAATCGTCCATATCGAAGATTTGTTTAATCAAAA    650

BSNT_03242___    651 AAGTGACAGCAGCCGAATTTCTGAGGAAGATGATTTTCATCCTAATGGTA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    651 AAGTGACAGCAGCCGAATTTCTGAGGAAGATGATTTTCATCCTAATGGTA    700

BSNT_03242___    701 CGGGTTATTCTCTTATCGCAAAGCGCGTCTATCAAGCCATTAAAAAAGAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21740___yp    701 CGGGTTATTCTCTTATCGCAAAGCGCGTCTATCAAGCCATTAAAAAAGAA    750

BSNT_03242___    751 GGATTACCGAAAGAGTAG    768
                     ||||||||||||||||||
BSU21740___yp    751 GGATTACCGAAAGAGTAG    768


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