Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02877 and BSU21600

See DNA alignment / Visit BSNT_02877 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_02877.1.22522.seq
#    -bsequence pep-align/BSU21600___yokG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02877-BSU21600___yokG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02877-BSU21600___yokG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02877
# 2: BSU21600___yokG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 359
# Identity:     168/359 (46.8%)
# Similarity:   216/359 (60.2%)
# Gaps:          78/359 (21.7%)
# Score: 842.0
# 
#
#=======================================

BSNT_02877         1 -------------------MEKEGLLISTRFWANTQADILTGTGLPVSDE     31
                                        :.::| ||||.:||.|||:||||||||||::
BSU21600___yo      1 MKYDNLLDATSQYGPQDLLLGRDG-LISTGYWAKTQANILTGTGLPVSND     49

BSNT_02877        32 EMKTYLAIPDDVEIPQDFQKIYDVYNEYKQLCNWWMKNLFSSVLNMVNDI     81
                     ||||||.:|.:|||||||||:||||||||:||:||::.|.|.|..|.|||
BSU21600___yo     50 EMKTYLNLPKNVEIPQDFQKLYDVYNEYKKLCDWWLEKLLSCVNKMANDI     99

BSNT_02877        82 NNIGSLATRTINSDIKL-LQIMSNDSNEQGRQEVAKQFQSSCSKLAGILN    130
                     .|:||..:..||..::. |:.::..||:|.||:..:.|...|..|...|:
BSU21600___yo    100 YNVGSTTSELINEALQPGLRAITTASNDQDRQDAIQDFHEVCLILMRELD    149

BSNT_02877       131 QQQQSMKEVQNQLNSLLQGSNDCIGVRQLNNSLEKEVAYLDSQYNDESEM    180
                     :.|||||:|||.|||.|||.|:.|||.|||||.|:.:.|||||||||||:
BSU21600___yo    150 ENQQSMKDVQNLLNSFLQGGNNFIGVTQLNNSFEEVMTYLDSQYNDESEI    199

BSNT_02877       181 HDSINMFLGLKKLLGIFVEGQDINEKVKFSFDLGPLFGFIVSEILECSDI    230
                     ||.:|:|:..|||||..:|..:||||||||.:||||.|:||||:||.||:
BSU21600___yo    200 HDLLNIFMQFKKLLGESLEEHEINEKVKFSSELGPLIGYIVSEMLEYSDV    249

BSNT_02877       231 QSVKQQIDHFLNKLNNIDAQLSLEVKVLGMLHSINIDLVNLIAQAEKSKE    280
                     |..||:||:|.| ||.:|||::|.||||.:.|.|||||.|:|.|||:|.|
BSU21600___yo    250 QMFKQRIDNFQN-LNGVDAQVALVVKVLSLFHGINIDLHNVIYQAERSLE    298

BSNT_02877       281 FIG-----------------------------------------------    283
                     ||.                                               
BSU21600___yo    299 FIEQTEGNWHSIANQFYSLAQGFENEDINKLSTDLDNAAATWEAVANKAK    348

BSNT_02877       283 ---------    283
                              
BSU21600___yo    349 EFVTNSYQG    357


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.