Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02877 and BSU21600

See Amino acid alignment / Visit BSNT_02877 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence dna-align/BSNT_02877.1.22522.seq
#    -bsequence dna-align/BSU21600___yokG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02877-BSU21600___yokG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02877-BSU21600___yokG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02877
# 2: BSU21600___yokG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1111
# Identity:     661/1111 (59.5%)
# Similarity:   661/1111 (59.5%)
# Gaps:         296/1111 (26.6%)
# Score: 2492.0
# 
#
#=======================================

BSNT_02877         0 --------------------------------------------------      0
                                                                       
BSU21600___yo      1 ATGAAATATGATAATCTTTTAGATGCAACATCCCAATATGGACCACAGGA     50

BSNT_02877         1 -------TTGGAAAAAGAGGGGCTTTTAATATCTACTAGATTCTGGGCAA     43
                            ||.|.||.|||.||||   |||||||||||.|||..|||||||
BSU21600___yo     51 TCTTTTATTAGGAAGAGATGGGC---TAATATCTACTGGATATTGGGCAA     97

BSNT_02877        44 ATACTCAAGCGGATATTCTTACTGGAACGGGTTTACCTGTGAGCGATGAA     93
                     |.||||||||..||||||||||||||||||||||.|||||||||.||||.
BSU21600___yo     98 AAACTCAAGCTAATATTCTTACTGGAACGGGTTTGCCTGTGAGCAATGAT    147

BSNT_02877        94 GAGATGAAAACTTATCTG-GCTATACCCGATGACGTTGAAATCCCTCAAG    142
                     |||||||||||||||.|| .|| ||||..|..||||||||||.|||||||
BSU21600___yo    148 GAGATGAAAACTTATTTGAACT-TACCGAAAAACGTTGAAATACCTCAAG    196

BSNT_02877       143 ATTTTCAAAAAATATATGATGTTTATAACGAATATAAACAGTTGTGTAAC    192
                     |||||||.|||.||||||||||||||||||||||||||.||||||||.||
BSU21600___yo    197 ATTTTCAGAAATTATATGATGTTTATAACGAATATAAAAAGTTGTGTGAC    246

BSNT_02877       193 TGGTGGATGAAGAATTTATTCAGCAGTGTTCTTAATATGGTTAACGATAT    242
                     ||||||.||.||||.|||||.|||.|||||..|||.||||.|||.|||||
BSU21600___yo    247 TGGTGGTTGGAGAAATTATTAAGCTGTGTTAATAAAATGGCTAATGATAT    296

BSNT_02877       243 TAATAATATTGGATCT-----TTGGCAACTAGAACGATAAATAGTGATAT    287
                     ..|.|||.||||.|||     ||.|.||.|     ||||||         
BSU21600___yo    297 ATACAATGTTGGGTCTACCACTTCGGAATT-----GATAAA---------    332

BSNT_02877       288 AAAATTATTACAAATAATGTCTAA---CGAT----------AGCAATGAA    324
                     ..||..||||| ||..|.||.|||   |.||          ||||||||.
BSU21600___yo    333 CGAAGCATTAC-AACCAGGTTTAAGGGCAATTACAACTGCAAGCAATGAT    381

BSNT_02877       325 CAAGGAAGACAAGAGGTTGCGAAGCAA---TTTCA----GTCT-TCCTGT    366
                     ||||..||||||||   |||.|..|||   |||||    |||| ||.|.|
BSU21600___yo    382 CAAGATAGACAAGA---TGCTATTCAAGATTTTCATGAGGTCTGTCTTAT    428

BSNT_02877       367 TC-------AAAGCTTGCTGGAATACTCAATCAACAACAACAGTCTATGA    409
                     .|       |.||||.|.||.|      |||||||||      |||||||
BSU21600___yo    429 ACTTATGAGAGAGCTCGATGAA------AATCAACAA------TCTATGA    466

BSNT_02877       410 AAGAGGTTCAAAACCAATTAAATTCCCTTCTTCAAGGTAGTAACGACTGT    459
                     ||||.||||||||.|.|.||||||||.||||||||||..|||||.|||..
BSU21600___yo    467 AAGATGTTCAAAATCTACTAAATTCCTTTCTTCAAGGAGGTAACAACTTC    516

BSNT_02877       460 ATAGGTGTTAGACAATTGAATAATTCTTTAGAAAAAGAAGTCGCATATTT    509
                     ||||||||||.|||||||||.||||||||.|||.|||.|.|..|.|||||
BSU21600___yo    517 ATAGGTGTTACACAATTGAACAATTCTTTTGAAGAAGTAATGACTTATTT    566

BSNT_02877       510 AGATTCACAGTATAATGATGAGAGTGAGATGCATGATTCAATAAATATGT    559
                     |||||||||.||.|||||||||||.|||||.|||||||.|.|.|||||.|
BSU21600___yo    567 AGATTCACAATACAATGATGAGAGCGAGATACATGATTTATTGAATATAT    616

BSNT_02877       560 TCTTAGGATTAAAAAAATTATTGGGTATATTTGTTGAAGGGCAAGATATT    609
                     ||.|...|||.||||||||.||||||..|..|.||||||.|||.||.||.
BSU21600___yo    617 TCATGCAATTTAAAAAATTGTTGGGTGAAAGTCTTGAAGAGCATGAGATA    666

BSNT_02877       610 AATGAGAAAGTAAAATTCAGCTTTGATCTAGGGCCTTTATTTGGTTTTAT    659
                     ||||||||||||||||||||||.|||..||||.||||||.|.||.|.|||
BSU21600___yo    667 AATGAGAAAGTAAAATTCAGCTCTGAGTTAGGCCCTTTAATCGGGTATAT    716

BSNT_02877       660 TGTATCTGAAATATTAGAGTGTTCCGATATACAATCAGTTAAACAACAAA    709
                     .|||||.|||||.|||||||.|||.|||.|.|||....|||||||||.||
BSU21600___yo    717 AGTATCCGAAATGTTAGAGTATTCTGATGTTCAAATGTTTAAACAACGAA    766

BSNT_02877       710 TTGATCATTTTCTGAATAAGTTAAACAATATAGATGCACAACTTTCATTA    759
                     |||||.||||||.||||   ||||||..|.|||||||||||.||.|||||
BSU21600___yo    767 TTGATAATTTTCAGAAT---TTAAACGGTGTAGATGCACAAGTTGCATTA    813

BSNT_02877       760 GAAGTAAAAGTTTTGGGGATGCTTCACAGTATCAATATAGACTTGGTTAA    809
                     |..|||||||||||..|..||.|||||.|.|||||||||||||||..|||
BSU21600___yo    814 GTTGTAAAAGTTTTAAGTCTGTTTCACGGCATCAATATAGACTTGCATAA    863

BSNT_02877       810 TTTAATAGCTCAAGCAGAAAAGTCTAAGGAGTTTATAGGATAA-------    852
                     |.|||||...||.|||||||.||||..|||||||||||.|.||       
BSU21600___yo    864 TGTAATATACCAGGCAGAAAGGTCTCTGGAGTTTATAGAACAAACTGAAG    913

BSNT_02877       852 --------------------------------------------------    852
                                                                       
BSU21600___yo    914 GAAACTGGCATTCTATAGCAAATCAATTTTATTCACTCGCACAAGGGTTT    963

BSNT_02877       852 --------------------------------------------------    852
                                                                       
BSU21600___yo    964 GAGAATGAGGATATCAATAAGCTTTCTACGGATCTTGATAATGCTGCGGC   1013

BSNT_02877       852 --------------------------------------------------    852
                                                                       
BSU21600___yo   1014 CACTTGGGAAGCTGTTGCTAATAAAGCAAAAGAGTTTGTAACAAATTCAT   1063

BSNT_02877       852 -----------    852
                                
BSU21600___yo   1064 ACCAAGGATAA   1074


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