Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02877 and BSU21600
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_02877.1.22522.seq
# -bsequence dna-align/BSU21600___yokG.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02877-BSU21600___yokG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02877-BSU21600___yokG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02877
# 2: BSU21600___yokG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1111
# Identity: 661/1111 (59.5%)
# Similarity: 661/1111 (59.5%)
# Gaps: 296/1111 (26.6%)
# Score: 2492.0
#
#
#=======================================
BSNT_02877 0 -------------------------------------------------- 0
BSU21600___yo 1 ATGAAATATGATAATCTTTTAGATGCAACATCCCAATATGGACCACAGGA 50
BSNT_02877 1 -------TTGGAAAAAGAGGGGCTTTTAATATCTACTAGATTCTGGGCAA 43
||.|.||.|||.|||| |||||||||||.|||..|||||||
BSU21600___yo 51 TCTTTTATTAGGAAGAGATGGGC---TAATATCTACTGGATATTGGGCAA 97
BSNT_02877 44 ATACTCAAGCGGATATTCTTACTGGAACGGGTTTACCTGTGAGCGATGAA 93
|.||||||||..||||||||||||||||||||||.|||||||||.||||.
BSU21600___yo 98 AAACTCAAGCTAATATTCTTACTGGAACGGGTTTGCCTGTGAGCAATGAT 147
BSNT_02877 94 GAGATGAAAACTTATCTG-GCTATACCCGATGACGTTGAAATCCCTCAAG 142
|||||||||||||||.|| .|| ||||..|..||||||||||.|||||||
BSU21600___yo 148 GAGATGAAAACTTATTTGAACT-TACCGAAAAACGTTGAAATACCTCAAG 196
BSNT_02877 143 ATTTTCAAAAAATATATGATGTTTATAACGAATATAAACAGTTGTGTAAC 192
|||||||.|||.||||||||||||||||||||||||||.||||||||.||
BSU21600___yo 197 ATTTTCAGAAATTATATGATGTTTATAACGAATATAAAAAGTTGTGTGAC 246
BSNT_02877 193 TGGTGGATGAAGAATTTATTCAGCAGTGTTCTTAATATGGTTAACGATAT 242
||||||.||.||||.|||||.|||.|||||..|||.||||.|||.|||||
BSU21600___yo 247 TGGTGGTTGGAGAAATTATTAAGCTGTGTTAATAAAATGGCTAATGATAT 296
BSNT_02877 243 TAATAATATTGGATCT-----TTGGCAACTAGAACGATAAATAGTGATAT 287
..|.|||.||||.||| ||.|.||.| ||||||
BSU21600___yo 297 ATACAATGTTGGGTCTACCACTTCGGAATT-----GATAAA--------- 332
BSNT_02877 288 AAAATTATTACAAATAATGTCTAA---CGAT----------AGCAATGAA 324
..||..||||| ||..|.||.||| |.|| ||||||||.
BSU21600___yo 333 CGAAGCATTAC-AACCAGGTTTAAGGGCAATTACAACTGCAAGCAATGAT 381
BSNT_02877 325 CAAGGAAGACAAGAGGTTGCGAAGCAA---TTTCA----GTCT-TCCTGT 366
||||..|||||||| |||.|..||| ||||| |||| ||.|.|
BSU21600___yo 382 CAAGATAGACAAGA---TGCTATTCAAGATTTTCATGAGGTCTGTCTTAT 428
BSNT_02877 367 TC-------AAAGCTTGCTGGAATACTCAATCAACAACAACAGTCTATGA 409
.| |.||||.|.||.| ||||||||| |||||||
BSU21600___yo 429 ACTTATGAGAGAGCTCGATGAA------AATCAACAA------TCTATGA 466
BSNT_02877 410 AAGAGGTTCAAAACCAATTAAATTCCCTTCTTCAAGGTAGTAACGACTGT 459
||||.||||||||.|.|.||||||||.||||||||||..|||||.|||..
BSU21600___yo 467 AAGATGTTCAAAATCTACTAAATTCCTTTCTTCAAGGAGGTAACAACTTC 516
BSNT_02877 460 ATAGGTGTTAGACAATTGAATAATTCTTTAGAAAAAGAAGTCGCATATTT 509
||||||||||.|||||||||.||||||||.|||.|||.|.|..|.|||||
BSU21600___yo 517 ATAGGTGTTACACAATTGAACAATTCTTTTGAAGAAGTAATGACTTATTT 566
BSNT_02877 510 AGATTCACAGTATAATGATGAGAGTGAGATGCATGATTCAATAAATATGT 559
|||||||||.||.|||||||||||.|||||.|||||||.|.|.|||||.|
BSU21600___yo 567 AGATTCACAATACAATGATGAGAGCGAGATACATGATTTATTGAATATAT 616
BSNT_02877 560 TCTTAGGATTAAAAAAATTATTGGGTATATTTGTTGAAGGGCAAGATATT 609
||.|...|||.||||||||.||||||..|..|.||||||.|||.||.||.
BSU21600___yo 617 TCATGCAATTTAAAAAATTGTTGGGTGAAAGTCTTGAAGAGCATGAGATA 666
BSNT_02877 610 AATGAGAAAGTAAAATTCAGCTTTGATCTAGGGCCTTTATTTGGTTTTAT 659
||||||||||||||||||||||.|||..||||.||||||.|.||.|.|||
BSU21600___yo 667 AATGAGAAAGTAAAATTCAGCTCTGAGTTAGGCCCTTTAATCGGGTATAT 716
BSNT_02877 660 TGTATCTGAAATATTAGAGTGTTCCGATATACAATCAGTTAAACAACAAA 709
.|||||.|||||.|||||||.|||.|||.|.|||....|||||||||.||
BSU21600___yo 717 AGTATCCGAAATGTTAGAGTATTCTGATGTTCAAATGTTTAAACAACGAA 766
BSNT_02877 710 TTGATCATTTTCTGAATAAGTTAAACAATATAGATGCACAACTTTCATTA 759
|||||.||||||.|||| ||||||..|.|||||||||||.||.|||||
BSU21600___yo 767 TTGATAATTTTCAGAAT---TTAAACGGTGTAGATGCACAAGTTGCATTA 813
BSNT_02877 760 GAAGTAAAAGTTTTGGGGATGCTTCACAGTATCAATATAGACTTGGTTAA 809
|..|||||||||||..|..||.|||||.|.|||||||||||||||..|||
BSU21600___yo 814 GTTGTAAAAGTTTTAAGTCTGTTTCACGGCATCAATATAGACTTGCATAA 863
BSNT_02877 810 TTTAATAGCTCAAGCAGAAAAGTCTAAGGAGTTTATAGGATAA------- 852
|.|||||...||.|||||||.||||..|||||||||||.|.||
BSU21600___yo 864 TGTAATATACCAGGCAGAAAGGTCTCTGGAGTTTATAGAACAAACTGAAG 913
BSNT_02877 852 -------------------------------------------------- 852
BSU21600___yo 914 GAAACTGGCATTCTATAGCAAATCAATTTTATTCACTCGCACAAGGGTTT 963
BSNT_02877 852 -------------------------------------------------- 852
BSU21600___yo 964 GAGAATGAGGATATCAATAAGCTTTCTACGGATCTTGATAATGCTGCGGC 1013
BSNT_02877 852 -------------------------------------------------- 852
BSU21600___yo 1014 CACTTGGGAAGCTGTTGCTAATAAAGCAAAAGAGTTTGTAACAAATTCAT 1063
BSNT_02877 852 ----------- 852
BSU21600___yo 1064 ACCAAGGATAA 1074
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