Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03089 and BSU21520

See DNA alignment / Visit BSNT_03089 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:32
# Commandline: needle
#    -asequence pep-align/BSNT_03089.1.22522.seq
#    -bsequence pep-align/BSU21520___yolC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03089-BSU21520___yolC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03089-BSU21520___yolC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03089
# 2: BSU21520___yolC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 111
# Identity:      55/111 (49.5%)
# Similarity:    61/111 (55.0%)
# Gaps:          32/111 (28.8%)
# Score: 239.5
# 
#
#=======================================

BSNT_03089         1 MKKRLIEFLILVPVLIMSGITLTEANKKSPLEVIGSIRDEFGLFSVQIGQ     50
                     ||||||.||:|||.||||||||.|||||||||||.:||||||:|||||||
BSU21520___yo      1 MKKRLIGFLVLVPALIMSGITLIEANKKSPLEVIDNIRDEFGIFSVQIGQ     50

BSNT_03089        51 TDPAITIAWIIPK--VKQRKNIKFIYSKMIL-------------------     79
                     |||||||.....|  .|.|:.:|...|:...                   
BSU21520___yo     51 TDPAITIGMDQTKSEAKLREYLKDNLSREAKEKYKIYILKDDINKLEKEH    100

BSNT_03089        79 -----------     79
                                
BSU21520___yo    101 REYLKANNPNK    111


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