Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03088 and BSU21510

See DNA alignment / Visit BSNT_03088 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:32
# Commandline: needle
#    -asequence pep-align/BSNT_03088.1.22522.seq
#    -bsequence pep-align/BSU21510___yolD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03088-BSU21510___yolD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03088-BSU21510___yolD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03088
# 2: BSU21510___yolD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      34/110 (30.9%)
# Similarity:    36/110 (32.7%)
# Gaps:          68/110 (61.8%)
# Score: 155.5
# 
#
#=======================================

BSNT_03088         1 ------------MMLPEHLTQLKQDLIDVSKIEKPALDDQQIEEMGIPFL     38
                                 |||||||||||||||||||||||:|||||||||.|...
BSU21510___yo      1 MLRDRGTIKWTSMMLPEHLTQLKQDLIDVSKIEKPSLDDQQIEEMDILVS     50

BSNT_03088        39 R--HWN--------------------------------------------     42
                     .  .:|                                            
BSU21510___yo     51 EALEFNKELQFKLFHNGFVENVTGRVHYINFEQQKLHVKDQNDNTVYINM    100

BSNT_03088        42 ----------     42
                               
BSU21510___yo    101 NNIIGVTYND    110


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