Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03088 and BSU21510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:32
# Commandline: needle
# -asequence dna-align/BSNT_03088.1.22522.seq
# -bsequence dna-align/BSU21510___yolD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03088-BSU21510___yolD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03088-BSU21510___yolD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03088
# 2: BSU21510___yolD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 117/333 (35.1%)
# Similarity: 117/333 (35.1%)
# Gaps: 204/333 (61.3%)
# Score: 527.0
#
#
#=======================================
BSNT_03088 1 ------------------------------------ATGATGCTCCCAGA 14
||||||||.|||||
BSU21510___yo 1 ATGCTTAGAGATCGAGGAACAATCAAATGGACATCAATGATGCTTCCAGA 50
BSNT_03088 15 GCATTTAACACAGCTTAAACAAGATTTGATTGATGTATCAAAAATTGAAA 64
.|||||.|||||||||||||||||||||||||||||||||||||||||||
BSU21510___yo 51 ACATTTGACACAGCTTAAACAAGATTTGATTGATGTATCAAAAATTGAAA 100
BSNT_03088 65 AGCCAGCTTTAGATGATCAACAAATTGAGGAAATGGGTATTC-CGTTTCT 113
|||||.|.||||||||||||||||||||.||.||||.||||| |||.|||
BSU21510___yo 101 AGCCATCCTTAGATGATCAACAAATTGAAGAGATGGATATTCTCGTCTCT 150
BSNT_03088 114 GAGGCATTGGAATTAA---------------------------------- 129
||||||.|.|||||.|
BSU21510___yo 151 GAGGCACTTGAATTTAACAAAGAGTTGCAATTTAAACTTTTTCACAATGG 200
BSNT_03088 129 -------------------------------------------------- 129
BSU21510___yo 201 ATTCGTTGAAAATGTCACCGGCAGAGTCCATTACATAAATTTTGAACAAC 250
BSNT_03088 129 -------------------------------------------------- 129
BSU21510___yo 251 AAAAGCTTCACGTAAAAGACCAGAATGACAATACAGTTTATATCAACATG 300
BSNT_03088 129 --------------------------------- 129
BSU21510___yo 301 AATAACATCATAGGAGTTACATACAATGATTGA 333
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