Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02892 and BSU20950

See DNA alignment / Visit BSNT_02892 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_02892___yopB.1.22522.seq
#    -bsequence pep-align/BSU20950___yopB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02892___yopB-BSU20950___yopB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02892___yopB-BSU20950___yopB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02892___yopB
# 2: BSU20950___yopB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      58/81 (71.6%)
# Similarity:    63/81 (77.8%)
# Gaps:          11/81 (13.6%)
# Score: 293.0
# 
#
#=======================================

BSNT_02892___      1 MIKSKLKTIIDQRKISIRKLSRDIDHEYPTVRKLYNDEMERYPRELFDKV     50
                     ||:|.||:|||:||||||||||||||||||||||||||||||||:|.|||
BSU20950___yo      1 MIRSNLKSIIDERKISIRKLSRDIDHEYPTVRKLYNDEMERYPRDLLDKV     50

BSNT_02892___     51 CPYQNIELHELLIFQK-----DHISKVRMSK     76
                     |.|.||||.|||||:|     ||..      
BSU20950___yo     51 CTYLNIELQELLIFEKSHNHIDHSG------     75


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