Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02892 and BSU20950

See Amino acid alignment / Visit BSNT_02892 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence dna-align/BSNT_02892___yopB.1.22522.seq
#    -bsequence dna-align/BSU20950___yopB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02892___yopB-BSU20950___yopB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02892___yopB-BSU20950___yopB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02892___yopB
# 2: BSU20950___yopB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity:     190/236 (80.5%)
# Similarity:   190/236 (80.5%)
# Gaps:          13/236 ( 5.5%)
# Score: 796.5
# 
#
#=======================================

BSNT_02892___      1 ATGATTAAATCAAAGTTAAAAACGATTATAGACCAAAGAAAGATCAGTAT     50
                     |||||||.||||||.|||||..|.||.||||||.||||||||||||||||
BSU20950___yo      1 ATGATTAGATCAAATTTAAAGTCCATAATAGACGAAAGAAAGATCAGTAT     50

BSNT_02892___     51 CCGGAAACTTTCCAGAGATATTGATCATGAGTATCCAACTGTCAGAAAGC    100
                     ||||||.||.||.|||||||||||||||||||||||||||||||||||||
BSU20950___yo     51 CCGGAAGCTATCTAGAGATATTGATCATGAGTATCCAACTGTCAGAAAGC    100

BSNT_02892___    101 TATATAATGACGAAATGGAGCGGTATCCGAGAGAGCTGTTTGATAAAGTC    150
                     |.||||||||||||||||||||||||||.|||||.|||||.|||||||||
BSU20950___yo    101 TTTATAATGACGAAATGGAGCGGTATCCAAGAGATCTGTTAGATAAAGTC    150

BSNT_02892___    151 TGTCCCTATCAAAACATCGAACTGCATGAGTTGTTGATATTCCAAAAAGA    200
                     |||.|.||.|.|||||||||.|||||.||.|||.||||||||.|||||..
BSU20950___yo    151 TGTACATACCTAAACATCGAGCTGCAGGAATTGCTGATATTCGAAAAAAG    200

BSNT_02892___    201 TCAT----ATTTCTA-AAGTGAGAATGTCTAAATGA    231
                     .|||    ||.||.| .|.|.||.|||.        
BSU20950___yo    201 CCATAACCATATCGATCACTCAGGATGA--------    228


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