Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02892 and BSU20950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_02892___yopB.1.22522.seq
# -bsequence dna-align/BSU20950___yopB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02892___yopB-BSU20950___yopB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02892___yopB-BSU20950___yopB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02892___yopB
# 2: BSU20950___yopB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity: 190/236 (80.5%)
# Similarity: 190/236 (80.5%)
# Gaps: 13/236 ( 5.5%)
# Score: 796.5
#
#
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BSNT_02892___ 1 ATGATTAAATCAAAGTTAAAAACGATTATAGACCAAAGAAAGATCAGTAT 50
|||||||.||||||.|||||..|.||.||||||.||||||||||||||||
BSU20950___yo 1 ATGATTAGATCAAATTTAAAGTCCATAATAGACGAAAGAAAGATCAGTAT 50
BSNT_02892___ 51 CCGGAAACTTTCCAGAGATATTGATCATGAGTATCCAACTGTCAGAAAGC 100
||||||.||.||.|||||||||||||||||||||||||||||||||||||
BSU20950___yo 51 CCGGAAGCTATCTAGAGATATTGATCATGAGTATCCAACTGTCAGAAAGC 100
BSNT_02892___ 101 TATATAATGACGAAATGGAGCGGTATCCGAGAGAGCTGTTTGATAAAGTC 150
|.||||||||||||||||||||||||||.|||||.|||||.|||||||||
BSU20950___yo 101 TTTATAATGACGAAATGGAGCGGTATCCAAGAGATCTGTTAGATAAAGTC 150
BSNT_02892___ 151 TGTCCCTATCAAAACATCGAACTGCATGAGTTGTTGATATTCCAAAAAGA 200
|||.|.||.|.|||||||||.|||||.||.|||.||||||||.|||||..
BSU20950___yo 151 TGTACATACCTAAACATCGAGCTGCAGGAATTGCTGATATTCGAAAAAAG 200
BSNT_02892___ 201 TCAT----ATTTCTA-AAGTGAGAATGTCTAAATGA 231
.||| ||.||.| .|.|.||.|||.
BSU20950___yo 201 CCATAACCATATCGATCACTCAGGATGA-------- 228
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