Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05060 and BSU20730

See DNA alignment / Visit BSNT_05060 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_05060___yopX.1.22522.seq
#    -bsequence pep-align/BSU20730___yopX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05060___yopX-BSU20730___yopX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05060___yopX-BSU20730___yopX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05060___yopX
# 2: BSU20730___yopX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:      61/146 (41.8%)
# Similarity:    84/146 (57.5%)
# Gaps:          19/146 (13.0%)
# Score: 246.5
# 
#
#=======================================

BSNT_05060___      1 MNTAYRVWDGEHMHYWDDEGIKLLIE--GDKWT---LYLEVATGHLLDVA     45
                     |||||||||||.||||||||:.|:|:  || ||   ||.:|    |:.|.
BSU20730___yo      1 MNTAYRVWDGEQMHYWDDEGLSLIIKSNGD-WTLKRLYTDV----LVPVV     45

BSNT_05060___     46 DSEDGKSVLMWGTGSKDKKGKDIYQKDITEESYIHPMSKENIIDRYVIER     95
                     ||.:..:.||||.   ..:||.||.:.|.:   |....||: .|...::.
BSU20730___yo     46 DSTNRNAALMWGA---KVRGKFIYDRSIVK---ITSDDKES-SDVCEVKF     88

BSNT_05060___     96 KNGFDRIE--HVSGKEGFYRHLWLRTDEVEVIGDVFQNPDLLEGAE    139
                     .:|..:::  .:|.........|:....:||||||:|||:||||.:
BSU20730___yo     89 SDGVFQVDVSKISADYDVTAVGWVEYATIEVIGDVYQNPELLEGVK    134


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