Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02806 and BSU20670

See DNA alignment / Visit BSNT_02806 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_02806.1.22522.seq
#    -bsequence pep-align/BSU20670___yoqD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02806-BSU20670___yoqD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02806-BSU20670___yoqD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02806
# 2: BSU20670___yoqD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity:     106/269 (39.4%)
# Similarity:   141/269 (52.4%)
# Gaps:          33/269 (12.3%)
# Score: 404.0
# 
#
#=======================================

BSNT_02806         1 --MMPNVLKDNNQLFINSREVAEMMGKKHFHLTRDIEGYIRVISTNPNLD     48
                       ....|::.|.||.::|||||||:||:|..|.|.|:||:.:: .|..|.
BSU20670___yo      1 MESYLTVIEQNGQLLVDSREVAEMVGKRHTDLLRSIDGYVAIL-LNAKLR     49

BSNT_02806        49 SRNFFIPSSYMDAKGECRKCYLLTRKGCDMVANKMTGEKGVLFTAAYVTK     98
                     |..||:.|:|.||.|...|.:.|||||||||||||||.|||||||.||:|
BSU20670___yo     50 SVEFFLESTYKDATGRSLKHFHLTRKGCDMVANKMTGAKGVLFTAQYVSK     99

BSNT_02806        99 FEEMENKLKPNIPQSLPEALRLAADLAEKNEHL--LLENAQKNQMINEL-    145
                     |||||..||     :.|..:....|:.|....:  ..|...|.::..:| 
BSU20670___yo    100 FEEMEKALK-----ARPSLIDTYLDMNEDERAIAYFTERKAKRELQEQLT    144

BSNT_02806       146 --QPKASYYDLVLQNKSLLSISKIAKDYGMSGTKMNKLLHELGIQFKQGD    193
                       :||...||..|....|:.|.::||..|:.|...|.|     .:|.:.:
BSU20670___yo    145 LAEPKVEKYDRFLNTDGLMKIGQVAKAIGIKGMGQNNL-----FRFLREN    189

BSNT_02806       194 CWLL--------YQKYADKGYTQSKTHAIDSDKSKLHTYWTQKGRLFIYE    235
                     ..|:        ||||.::|:.|.||.. .|...|..|..|.||..||.:
BSU20670___yo    190 KVLIDGTNKNAPYQKYVERGFFQVKTQE-TSVGIKTITLVTPKGADFIVD    238

BSNT_02806       236 TLKNKKGILPIIEREERAS    254
                     .|| |.|     .:.|.||
BSU20670___yo    239 LLK-KHG-----HKREIAS    251


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