Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02806 and BSU20670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_02806.1.22522.seq
# -bsequence dna-align/BSU20670___yoqD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02806-BSU20670___yoqD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02806-BSU20670___yoqD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02806
# 2: BSU20670___yoqD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 906
# Identity: 477/906 (52.6%)
# Similarity: 477/906 (52.6%)
# Gaps: 291/906 (32.1%)
# Score: 1090.5
#
#
#=======================================
BSNT_02806 1 ATGATGCCAAATGTTTTAAAAGACAATAAT-------------CAACTAT 37
|||..||.|..|.|| |||.|||| ||.||.|
BSU20670___yo 1 ---ATGGAAAGTTATCTA----ACAGTAATTGAACAGAATGGACAGCTTT 43
BSNT_02806 38 TTATTAATAGTCGTGAAGTTGCGGAGATGATGGGTAAGAAAC------AT 81
|..||.|.||.||||||||.||.||||||.|.|||||||.|| ||
BSU20670___yo 44 TGGTTGACAGCCGTGAAGTGGCAGAGATGGTAGGTAAGAGACATACAGAT 93
BSNT_02806 82 TTCCACTTAACAAGAGATATTGAAGGTTATATA-CGA--GTAATATCAAC 128
|| |||| |||..||||||.||.|||.|| ||| .||.||
BSU20670___yo 94 TT--ACTT----AGAAGTATTGATGGATATGTAGCGATCTTACTA----- 132
BSNT_02806 129 CAATCCAAATTTGGATTC-GAGAAATTTTTTCATTCCATCTT-------- 169
||..||||.|||..||| |.|.|||||| ||||
BSU20670___yo 133 -AACGCAAAATTGCGTTCAGTGGAATTTT---------TCTTAGAAAGTA 172
BSNT_02806 170 CCTATATGGATGCAAAAGGAGAATGTCG-TAAGTG--TTATTTGC---TT 213
|.||||..|||||||..| |||| |.|.|| ..||||.| |.
BSU20670___yo 173 CATATAAAGATGCAACTG------GTCGCTCATTGAAGCATTTCCATTTA 216
BSNT_02806 214 ACTCGAAAAGGTTGTGACATGGTTGCAAACAAAATGACAGGTGAAAAAGG 263
||.||||||||.||.||.||||||||.||.||||||||.||||..|||||
BSU20670___yo 217 ACCCGAAAAGGATGCGATATGGTTGCTAATAAAATGACTGGTGCTAAAGG 266
BSNT_02806 264 TGTTTTGTTCACAGCTGCTTATGTAACAAAATTTGAAGAAATGGAAAA-- 311
.||.||.|||||||||...|||||..|.|||||||||||||||||.||
BSU20670___yo 267 GGTATTATTCACAGCTCAATATGTTTCTAAATTTGAAGAAATGGAGAAGG 316
BSNT_02806 312 ---CAAACTTAAGCCCAACATTCCTCAGTCATTACCAGAAGCTTTACGGC 358
.|||...|||.|| |||..|| .
BSU20670___yo 317 CGTTAAAAGCAAGACC-----------GTCCCTA---------------A 340
BSNT_02806 359 TTGCTGCTGATCTTGCAGAAAAGAATGAACAT-------------CTTCT 395
|||.|.|..|||| |||.|.|||||||.|| |||.|
BSU20670___yo 341 TTGATACATATCT---AGATATGAATGAAGATGAACGTGCCATTGCTTAT 387
BSNT_02806 396 T---CTG---GAAAATGCACA--GAAAAAT-CA-----AATGATAA-ATG 430
| ||| ||||| |||.| ||.||.| || ||| ||| ||.
BSU20670___yo 388 TTCACTGAAAGAAAA-GCAAAACGAGAATTGCAGGAGCAAT--TAACATT 434
BSNT_02806 431 AGCTACAACCTAAGGCATCTT-----ACTATGATTTGGTTT-----TACA 470
.||| .||||.||.| | |.||||| |.|.||| ||||
BSU20670___yo 435 GGCT-GAACCAAAAG-----TGGAGAAATATGA-TCGCTTTCTTAATACA 477
BSNT_02806 471 -------AAATAAATCCTTACTTTCAATCAG--CAAGATAGCTAAAGACT 511
.|||.|| ||| || |||| |.||.|||| |.
BSU20670___yo 478 GATGGATTAATGAA-----------AAT-AGGACAAG-TGGCAAAAG-CA 513
BSNT_02806 512 A-TGGAATGAGTGGAA----CTAAGATGAACAA---ACTT--CTCCATGA 551
| |||.||.|..|||| |.|| ||||| |.|| ||...|||
BSU20670___yo 514 ATTGGCATAAAAGGAATGGGCCAA----AACAATTTATTTCGCTTTTTGA 559
BSNT_02806 552 GTTAGGAATTCAAT-------TTAAGCAGGGGGACTGTTGGTTG------ 588
| |||| ||| ||| |||.|.|
BSU20670___yo 560 G---GGAA---AATAAAGTTCTTA-------------TTGATGGAACAAA 590
BSNT_02806 589 ----------CTATATCAGAAATACGCTGATAAAGG----TTACACACAA 624
|.||||||.|||||.|..||.|.||| ||.| |
BSU20670___yo 591 CAAAAACGCCCCATATCAAAAATATGTAGAAAGAGGATTCTTTC-----A 635
BSNT_02806 625 AGT-AAGACTCACG---CAA----TCGACTCTGATAAAAGCAAGCTTCAC 666
||| |||||.||.| ||| |.|| ||.|||.||| |.||
BSU20670___yo 636 AGTGAAGACCCAGGAGACAAGTGTTGGA-----ATTAAAACAA---TTAC 677
BSNT_02806 667 ACTTATTGGACTCAGAAAG--GCCG-----GTTGTTTATCTATGAAACCC 709
.|||.|| ||||..|||| |||| .|||||.|||| .|
BSU20670___yo 678 TCTTGTT--ACTCCTAAAGGTGCCGATTTTATTGTTGATCT-------TC 718
BSNT_02806 710 TAAAAAATAAAAAAGGTATACTTCCGATAATTGAACGAGAAGAACGTGCA 759
||||.| ||.|..||.|.| ||.|||||..| |||
BSU20670___yo 719 TAAAGA--AACATGGGCACA-------------AAAGAGAAATA---GCA 750
BSNT_02806 760 TCGTAA 765
||.||.
BSU20670___yo 751 TCATAG 756
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