Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03118 and BSU19150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:34
# Commandline: needle
# -asequence pep-align/BSNT_03118.1.22522.seq
# -bsequence pep-align/BSU19150___yocB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03118-BSU19150___yocB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03118-BSU19150___yocB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03118
# 2: BSU19150___yocB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity: 134/260 (51.5%)
# Similarity: 135/260 (51.9%)
# Gaps: 124/260 (47.7%)
# Score: 693.0
#
#
#=======================================
BSNT_03118 0 -------------------------------------------------- 0
BSU19150___yo 1 MAIDSLINKLQYVQLEPPDKILSLYLNTDMRDPEQQGGEWKIALKSGFSR 50
BSNT_03118 0 -------------------------------------------------- 0
BSU19150___yo 51 LKEYLAASDPEEEKCLDGIRAKMNQYLNAMGKDMPRSLVFFVSDSGIWEP 100
BSNT_03118 1 ------------------------MRQAYPSTAFILTQQHEVKIIETVLG 26
:||.||||||||||||||||||||||
BSU19150___yo 101 IKLQVPVDTRFYWEETAVLDQLKGLRQTYPSTAFILTQQHEVKIIETVLG 150
BSNT_03118 27 KIEAVERYEYDMINESWKNSHSAVDKAPPFEENRMREHVTENQSRLYKRL 76
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BSU19150___yo 151 KIEAVERYEYDMINESWKNSHSAVDKAPPFEENRMREHVTENQSRLYKRL 200
BSNT_03118 77 AASLDQKAAAKRWERMVIAGDKETADILDQHMNKPIHSKIQKNLLNENEH 126
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BSU19150___yo 201 AASLDQKAAAKRWERMVIAGDKETADILDQHMNKPIHSKIQKNLLNENEH 250
BSNT_03118 127 KVIEHLIKEA 136
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BSU19150___yo 251 KVIEHLIKEA 260
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