Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03118 and BSU19150

See Amino acid alignment / Visit BSNT_03118 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:34
# Commandline: needle
#    -asequence dna-align/BSNT_03118.1.22522.seq
#    -bsequence dna-align/BSU19150___yocB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03118-BSU19150___yocB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03118-BSU19150___yocB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03118
# 2: BSU19150___yocB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 783
# Identity:     406/783 (51.9%)
# Similarity:   406/783 (51.9%)
# Gaps:         372/783 (47.5%)
# Score: 2010.0
# 
#
#=======================================

BSNT_03118         0 --------------------------------------------------      0
                                                                       
BSU19150___yo      1 ATGGCGATTGATTCATTGATTAACAAATTACAGTATGTCCAATTGGAACC     50

BSNT_03118         0 --------------------------------------------------      0
                                                                       
BSU19150___yo     51 GCCGGATAAAATTCTCTCTCTGTATCTCAATACAGACATGAGAGATCCAG    100

BSNT_03118         0 --------------------------------------------------      0
                                                                       
BSU19150___yo    101 AGCAGCAGGGGGGAGAATGGAAGATTGCCCTAAAGTCAGGATTCAGCCGA    150

BSNT_03118         0 --------------------------------------------------      0
                                                                       
BSU19150___yo    151 TTAAAAGAGTATTTGGCAGCTAGTGATCCAGAGGAGGAAAAGTGTCTGGA    200

BSNT_03118         0 --------------------------------------------------      0
                                                                       
BSU19150___yo    201 TGGAATCAGGGCTAAAATGAATCAATACTTGAATGCAATGGGAAAAGACA    250

BSNT_03118         0 --------------------------------------------------      0
                                                                       
BSU19150___yo    251 TGCCCCGCAGTCTCGTGTTTTTTGTTTCCGACAGCGGCATATGGGAACCT    300

BSNT_03118         0 --------------------------------------------------      0
                                                                       
BSU19150___yo    301 ATTAAGCTTCAAGTCCCTGTAGATACAAGATTTTACTGGGAAGAAACAGC    350

BSNT_03118         1 ----------------------TTGCGCCAGGCATACCCAAGTACAGCGT     28
                                           |||||||||.|||||||||||||.||||
BSU19150___yo    351 TGTCCTGGATCAGCTAAAGGGTTTGCGCCAGACATACCCAAGTACGGCGT    400

BSNT_03118        29 TTATTTTAACTCAGCAGCATGAAGTGAAAATTATTGAAACCGTATTAGGA     78
                     ||||||||||||||||||||||||||||||||||||||||.||.||||||
BSU19150___yo    401 TTATTTTAACTCAGCAGCATGAAGTGAAAATTATTGAAACTGTTTTAGGA    450

BSNT_03118        79 AAAATTGAGGCGGTGGAGCGTTATGAGTATGATATGATCAATGAGTCTTG    128
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19150___yo    451 AAAATTGAGGCGGTGGAGCGTTATGAGTATGATATGATCAATGAGTCTTG    500

BSNT_03118       129 GAAGAATAGCCATTCCGCTGTAGACAAAGCGCCACCATTTGAAGAGAACC    178
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19150___yo    501 GAAGAATAGCCATTCCGCTGTAGACAAAGCGCCACCATTTGAAGAGAACC    550

BSNT_03118       179 GGATGAGGGAACATGTAACAGAGAACCAATCGAGACTGTATAAGCGGCTG    228
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19150___yo    551 GGATGAGGGAACATGTAACAGAGAACCAATCGAGACTGTATAAGCGGCTG    600

BSNT_03118       229 GCTGCCAGCCTTGATCAAAAAGCTGCCGCGAAAAGATGGGAACGAATGGT    278
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19150___yo    601 GCTGCCAGCCTTGATCAAAAAGCTGCCGCGAAAAGATGGGAACGAATGGT    650

BSNT_03118       279 TATCGCCGGGGATAAAGAAACGGCCGATATCTTGGATCAGCATATGAATA    328
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU19150___yo    651 TATTGCCGGGGATAAAGAAACGGCCGATATCTTGGATCAGCATATGAATA    700

BSNT_03118       329 AACCCATTCATTCGAAAATTCAAAAGAACCTGCTGAATGAAAATGAACAT    378
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19150___yo    701 AACCCATTCATTCGAAAATTCAAAAGAACCTGCTGAATGAAAATGAACAT    750

BSNT_03118       379 AAGGTCATTGAACATTTGATAAAAGAGGCGTAA    411
                     |||||||||||||||||||||||||||||||||
BSU19150___yo    751 AAGGTCATTGAACATTTGATAAAAGAGGCGTAA    783


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