Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03105 and BSU19060

See DNA alignment / Visit BSNT_03105 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:33
# Commandline: needle
#    -asequence pep-align/BSNT_03105___yobR.1.22522.seq
#    -bsequence pep-align/BSU19060___yobR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03105___yobR-BSU19060___yobR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03105___yobR-BSU19060___yobR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03105___yobR
# 2: BSU19060___yobR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     241/247 (97.6%)
# Similarity:   244/247 (98.8%)
# Gaps:           0/247 ( 0.0%)
# Score: 1277.0
# 
#
#=======================================

BSNT_03105___      1 MDDIHKIERLAAASWPAYFQKSIGQWLLRANFGVTKRANSVWTSADMPEG     50
                     ||||.|||||||||||||||||||:|||||||||||||||||||||||||
BSU19060___yo      1 MDDIRKIERLAAASWPAYFQKSIGKWLLRANFGVTKRANSVWTSADMPEG     50

BSNT_03105___     51 NFQLEAELFYQSLGLPVCFHISNASPKGLDDALADSRYEKVDECFQMTAL    100
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
BSU19060___yo     51 DFQLEAELFYQSLGLPVCFHISNASPKGLDDALADSRYEKVDECFQMTAL    100

BSNT_03105___    101 CRSIMSRTNDNSRFTYKWEQEPSSVWIGEFIQLEGFSPERHKGYKHIFER    150
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU19060___yo    101 CRSIMSRTNDNSRFTYKWEQEPSSVWIDEFIQLEGFSPERHKGYKHIFER    150

BSNT_03105___    151 MPPCKTFFKMYDKESLTALGTVSVIDGYGGLSNIVVAEEHRGKGAGTQVI    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19060___yo    151 MPPCKTFFKMYDKESLTALGTVSVIDGYGGLSNIVVAEEHRGKGAGTQVI    200

BSNT_03105___    201 RVLTEWAKNNGAERMFLQVMKDNLAAVSLYEKIGFSPISEHHYRIKR    247
                     |||||||||||||||||||||:||||||||.||||||||||||||||
BSU19060___yo    201 RVLTEWAKNNGAERMFLQVMKENLAAVSLYGKIGFSPISEHHYRIKR    247


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