Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03105 and BSU19060

See Amino acid alignment / Visit BSNT_03105 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:33
# Commandline: needle
#    -asequence dna-align/BSNT_03105___yobR.1.22522.seq
#    -bsequence dna-align/BSU19060___yobR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03105___yobR-BSU19060___yobR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03105___yobR-BSU19060___yobR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03105___yobR
# 2: BSU19060___yobR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 744
# Identity:     730/744 (98.1%)
# Similarity:   730/744 (98.1%)
# Gaps:           0/744 ( 0.0%)
# Score: 3594.0
# 
#
#=======================================

BSNT_03105___      1 ATGGATGACATTCACAAGATTGAACGGTTAGCGGCAGCTTCATGGCCGGC     50
                     |||||||||||||.||||||||||||.|||||||||||||||||||||||
BSU19060___yo      1 ATGGATGACATTCGCAAGATTGAACGATTAGCGGCAGCTTCATGGCCGGC     50

BSNT_03105___     51 TTATTTTCAAAAAAGCATAGGGCAATGGCTTCTCAGAGCGAATTTTGGCG    100
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU19060___yo     51 TTATTTTCAAAAAAGCATAGGGAAATGGCTTCTCAGAGCGAATTTTGGCG    100

BSNT_03105___    101 TAACCAAAAGGGCAAATAGCGTATGGACTTCTGCGGATATGCCTGAAGGG    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU19060___yo    101 TAACCAAAAGGGCAAATAGCGTATGGACGTCTGCGGATATGCCTGAAGGG    150

BSNT_03105___    151 AATTTTCAACTAGAGGCCGAACTTTTTTATCAAAGTTTAGGCTTACCTGT    200
                     .|||||||.|||||||||||||||||||||||||||||||||||||||||
BSU19060___yo    151 GATTTTCAGCTAGAGGCCGAACTTTTTTATCAAAGTTTAGGCTTACCTGT    200

BSNT_03105___    201 TTGTTTTCATATTAGCAACGCATCACCGAAAGGGCTTGATGACGCTTTGG    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU19060___yo    201 TTGTTTTCATATTAGCAACGCATCACCGAAAGGGCTTGATGACGCATTGG    250

BSNT_03105___    251 CAGACAGCCGTTATGAAAAGGTAGACGAGTGCTTCCAGATGACAGCGTTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19060___yo    251 CAGACAGCCGTTATGAAAAGGTAGACGAGTGCTTCCAGATGACAGCGTTG    300

BSNT_03105___    301 TGCCGGTCAATTATGAGCCGAACAAATGACAACAGCCGATTTACATACAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19060___yo    301 TGCCGGTCAATTATGAGCCGAACAAATGACAACAGCCGATTTACATACAA    350

BSNT_03105___    351 GTGGGAACAAGAGCCATCATCTGTTTGGATAGGTGAATTTATTCAATTGG    400
                     ||||||||||||||||||||||||||||||||.|||||||||||||||.|
BSU19060___yo    351 GTGGGAACAAGAGCCATCATCTGTTTGGATAGATGAATTTATTCAATTAG    400

BSNT_03105___    401 AAGGGTTTTCACCCGAGCGTCACAAAGGTTACAAACACATTTTCGAACGC    450
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU19060___yo    401 AAGGGTTTTCACCCGAGCGTCACAAAGGTTACAAACACATATTCGAACGC    450

BSNT_03105___    451 ATGCCGCCGTGTAAAACTTTTTTCAAGATGTATGACAAAGAAAGCCTGAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19060___yo    451 ATGCCGCCGTGTAAAACTTTTTTCAAGATGTATGACAAAGAAAGCCTGAC    500

BSNT_03105___    501 AGCGCTTGGCACGGTTTCTGTCATTGATGGTTATGGCGGACTTAGTAATA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19060___yo    501 AGCGCTTGGCACGGTTTCTGTCATTGATGGTTATGGCGGACTTAGTAATA    550

BSNT_03105___    551 TCGTTGTAGCTGAGGAGCACAGAGGAAAAGGGGCAGGAACCCAAGTGATC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19060___yo    551 TCGTTGTAGCTGAGGAGCACAGAGGAAAAGGGGCAGGAACCCAAGTGATC    600

BSNT_03105___    601 AGGGTGTTGACTGAATGGGCAAAAAACAACGGAGCGGAACGCATGTTTTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19060___yo    601 AGGGTGTTGACTGAATGGGCAAAAAACAACGGAGCGGAACGCATGTTTTT    650

BSNT_03105___    651 ACAAGTGATGAAAGACAATCTGGCGGCAGTTTCTTTATATGAAAAGATCG    700
                     |||||||||||||||.|||||||||||||||||||||||||.|||.||||
BSU19060___yo    651 ACAAGTGATGAAAGAAAATCTGGCGGCAGTTTCTTTATATGGAAAAATCG    700

BSNT_03105___    701 GATTTTCGCCTATATCGGAACACCATTACCGGATTAAAAGATGA    744
                     |.||||||||||||||||||||||||||||||||||||||||||
BSU19060___yo    701 GCTTTTCGCCTATATCGGAACACCATTACCGGATTAAAAGATGA    744


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