Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03072 and BSU18520

See DNA alignment / Visit BSNT_03072 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:31
# Commandline: needle
#    -asequence pep-align/BSNT_03072___yoxB.1.22522.seq
#    -bsequence pep-align/BSU18520___yoxB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03072___yoxB-BSU18520___yoxB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03072___yoxB-BSU18520___yoxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03072___yoxB
# 2: BSU18520___yoxB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     238/256 (93.0%)
# Similarity:   243/256 (94.9%)
# Gaps:           0/256 ( 0.0%)
# Score: 1232.0
# 
#
#=======================================

BSNT_03072___      1 MIVNHSCLKEFAEKLHSLPSSLTKSDLLISPFHLHQENELDIYYSPHNEY     50
                     ||:|.|||||||||:|.|||||||||||..||.|||||||.||||||||:
BSU18520___yo      1 MIINRSCLKEFAEKVHFLPSSLTKSDLLTDPFRLHQENELGIYYSPHNEF     50

BSNT_03072___     51 INRTATIVIAGITPGFSQMKTAYETAVESLRQGRTLEQMAVDTKIAAGFS    100
                     |||.|::|||||||||||||||||||.|||.||.||||||||||||||||
BSU18520___yo     51 INRDASLVIAGITPGFSQMKTAYETAAESLLQGGTLEQMAVDTKIAAGFS    100

BSNT_03072___    101 GSMRHNLITMLDLCGLPQAFGIQSAAKLFGELRHMLHTTSVIKYPVFIQQ    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18520___yo    101 GSMRHNLITMLDLCGLPQAFGIQSAAKLFGELRHMLHTTSVIKYPVFIQQ    150

BSNT_03072___    151 KNYTGYKPAITRSPILSTYAFGHFPAELNHVTGPALLIPLGKAAETVCET    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU18520___yo    151 KNYTGYKPAITHSPILSTYAFGHFPAELNHVTGPALLIPLGKAAETVCET    200

BSNT_03072___    201 LIRQHSLQNLICLNGFPHPSGANGHRLKQFSKNKEQLETQIRSFAALFDF    250
                     ||||||||||||||||||||||||||||||||||||||.||||||||.||
BSU18520___yo    201 LIRQHSLQNLICLNGFPHPSGANGHRLKQFSKNKEQLERQIRSFAALVDF    250

BSNT_03072___    251 AIEKRK    256
                     ||||||
BSU18520___yo    251 AIEKRK    256


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