Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03072 and BSU18520

See Amino acid alignment / Visit BSNT_03072 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:31
# Commandline: needle
#    -asequence dna-align/BSNT_03072___yoxB.1.22522.seq
#    -bsequence dna-align/BSU18520___yoxB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03072___yoxB-BSU18520___yoxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03072___yoxB-BSU18520___yoxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03072___yoxB
# 2: BSU18520___yoxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 771
# Identity:     728/771 (94.4%)
# Similarity:   728/771 (94.4%)
# Gaps:           0/771 ( 0.0%)
# Score: 3468.0
# 
#
#=======================================

BSNT_03072___      1 ATGATTGTAAACCACAGTTGCTTAAAGGAGTTCGCAGAAAAACTACATTC     50
                     ||||||.||||||.|||.||||||||.|||||||||||||||.||||||.
BSU18520___yo      1 ATGATTATAAACCGCAGCTGCTTAAAAGAGTTCGCAGAAAAAGTACATTT     50

BSNT_03072___     51 TCTTCCCTCTTCACTTACAAAGTCGGATTTACTTATTTCTCCATTTCATC    100
                     ||||||||||||||||||||||||.||||||||||.|..||||||||.||
BSU18520___yo     51 TCTTCCCTCTTCACTTACAAAGTCCGATTTACTTACTGATCCATTTCGTC    100

BSNT_03072___    101 TCCATCAAGAAAATGAACTTGACATCTACTATTCACCTCATAATGAATAT    150
                     |||||||||||||.|||||||.||||||||||||||||||||||||||.|
BSU18520___yo    101 TCCATCAAGAAAACGAACTTGGCATCTACTATTCACCTCATAATGAATTT    150

BSNT_03072___    151 ATCAATCGGACTGCTACGATTGTGATTGCCGGGATCACGCCGGGTTTTTC    200
                     |||||||||..|||..||.||||||||||||||||||||||.||||||||
BSU18520___yo    151 ATCAATCGGGATGCCTCGCTTGTGATTGCCGGGATCACGCCTGGTTTTTC    200

BSNT_03072___    201 CCAGATGAAAACAGCGTACGAAACAGCAGTCGAAAGTCTGCGGCAGGGCC    250
                     |||||||||.|||||||||||||||||.|.||||||.||||.|||.|||.
BSU18520___yo    201 CCAGATGAAGACAGCGTACGAAACAGCCGCCGAAAGCCTGCTGCAAGGCG    250

BSNT_03072___    251 GCACTCTTGAGCAAATGGCGGTAGATACAAAAATAGCAGCGGGTTTCTCC    300
                     |.|||||||||||||||||.|||||.||||||||||||||||||||||||
BSU18520___yo    251 GGACTCTTGAGCAAATGGCAGTAGACACAAAAATAGCAGCGGGTTTCTCC    300

BSNT_03072___    301 GGGTCGATGAGACATAACCTTATCACCATGCTGGATTTATGCGGGCTGCC    350
                     ||.||||||||||||||||||||.||||||||||||||||||||||||||
BSU18520___yo    301 GGATCGATGAGACATAACCTTATTACCATGCTGGATTTATGCGGGCTGCC    350

BSNT_03072___    351 GCAAGCTTTTGGCATTCAAAGCGCAGCAAAACTTTTTGGAGAATTACGGC    400
                     ||||||||||||||||||||||||.|||||.|||||||||||||||||||
BSU18520___yo    351 GCAAGCTTTTGGCATTCAAAGCGCCGCAAAGCTTTTTGGAGAATTACGGC    400

BSNT_03072___    401 ATATGCTCCATACAACTTCCGTTATTAAATATCCTGTCTTTATCCAGCAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18520___yo    401 ATATGCTCCATACAACTTCCGTTATTAAATATCCTGTCTTTATCCAGCAA    450

BSNT_03072___    451 AAAAACTATACCGGATACAAACCGGCCATCACTCGCTCTCCTATCCTAAG    500
                     ||||||||||||||||||||||||||.|||||||..||||||||||||||
BSU18520___yo    451 AAAAACTATACCGGATACAAACCGGCTATCACTCATTCTCCTATCCTAAG    500

BSNT_03072___    501 CACCTATGCTTTTGGGCACTTCCCTGCGGAGCTTAATCATGTGACGGGAC    550
                     |||.|||||||||||||||||||||||.||||||||.|||||||||||||
BSU18520___yo    501 CACTTATGCTTTTGGGCACTTCCCTGCAGAGCTTAACCATGTGACGGGAC    550

BSNT_03072___    551 CAGCTCTTCTCATTCCGTTAGGAAAAGCGGCCGAAACAGTGTGTGAAACA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18520___yo    551 CAGCTCTTCTCATTCCGTTAGGAAAAGCGGCCGAAACAGTGTGTGAAACA    600

BSNT_03072___    601 TTGATCAGACAGCACAGCCTTCAGAATTTGATTTGCCTTAACGGCTTTCC    650
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU18520___yo    601 TTGATCAGACAGCACAGCCTCCAGAATTTGATTTGCCTTAACGGCTTTCC    650

BSNT_03072___    651 CCATCCATCAGGCGCGAACGGCCATCGTTTGAAACAATTCAGCAAAAACA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18520___yo    651 CCATCCATCAGGCGCGAACGGCCATCGTTTGAAACAATTCAGCAAAAACA    700

BSNT_03072___    701 AAGAGCAACTAGAAACACAAATTCGTTCCTTTGCTGCATTGTTTGATTTC    750
                     |||||||||||||||.|||||||||||||||||||||||||.||||||||
BSU18520___yo    701 AAGAGCAACTAGAAAGACAAATTCGTTCCTTTGCTGCATTGGTTGATTTC    750

BSNT_03072___    751 GCTATAGAAAAGAGGAAATAA    771
                     |||||||||||||||||||||
BSU18520___yo    751 GCTATAGAAAAGAGGAAATAA    771


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.