Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03068 and BSU18490

See DNA alignment / Visit BSNT_03068 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:31
# Commandline: needle
#    -asequence pep-align/BSNT_03068.1.22522.seq
#    -bsequence pep-align/BSU18490___rtp.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03068-BSU18490___rtp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03068-BSU18490___rtp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03068
# 2: BSU18490___rtp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:      61/122 (50.0%)
# Similarity:    62/122 (50.8%)
# Gaps:          60/122 (49.2%)
# Score: 308.0
# 
#
#=======================================

BSNT_03068         0 --------------------------------------------------      0
                                                                       
BSU18490___rt      1 MKEEKRSSTGFLVKQRAFLKLYMITMTEQERLYGLKLLEVLRSEFKEIGF     50

BSNT_03068         1 ----------MHELLDDGILKQIKVKKEGAKLQEVVLYQFKDYEAAKLYK     40
                               :|||||||||||||||||||||||||||||||||||||||
BSU18490___rt     51 KPNHTEVYRSLHELLDDGILKQIKVKKEGAKLQEVVLYQFKDYEAAKLYK    100

BSNT_03068        41 KQLKVELDRCKKLIEKALSDNF     62
                     ||||||||||||||||||||||
BSU18490___rt    101 KQLKVELDRCKKLIEKALSDNF    122


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