Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03068 and BSU18490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:31
# Commandline: needle
# -asequence dna-align/BSNT_03068.1.22522.seq
# -bsequence dna-align/BSU18490___rtp.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03068-BSU18490___rtp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03068-BSU18490___rtp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03068
# 2: BSU18490___rtp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity: 189/369 (51.2%)
# Similarity: 189/369 (51.2%)
# Gaps: 180/369 (48.8%)
# Score: 945.0
#
#
#=======================================
BSNT_03068 0 -------------------------------------------------- 0
BSU18490___rt 1 ATGAAAGAAGAAAAAAGGAGTTCAACAGGCTTTTTAGTGAAACAGCGCGC 50
BSNT_03068 0 -------------------------------------------------- 0
BSU18490___rt 51 ATTTTTGAAGCTTTATATGATAACGATGACAGAGCAAGAGAGACTCTATG 100
BSNT_03068 0 -------------------------------------------------- 0
BSU18490___rt 101 GGTTAAAGCTGCTTGAAGTACTTCGGTCTGAATTTAAAGAGATTGGTTTT 150
BSNT_03068 1 ------------------------------TTGCATGAGCTTCTTGATGA 20
||||||||||||||||||||
BSU18490___rt 151 AAACCAAATCATACAGAAGTATACCGGTCTTTGCATGAGCTTCTTGATGA 200
BSNT_03068 21 CGGGATACTAAAACAAATTAAAGTAAAAAAAGAAGGGGCTAAGCTCCAGG 70
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18490___rt 201 CGGGATACTAAAACAAATTAAAGTAAAAAAAGAAGGGGCTAAGCTCCAGG 250
BSNT_03068 71 AAGTCGTCCTCTATCAATTTAAAGATTACGAAGCTGCCAAGCTATATAAA 120
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18490___rt 251 AAGTCGTCCTCTATCAATTTAAAGATTACGAAGCTGCCAAGCTATATAAA 300
BSNT_03068 121 AAACAGCTGAAGGTAGAGCTGGATCGCTGTAAAAAACTGATTGAAAAAGC 170
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18490___rt 301 AAACAGCTGAAGGTAGAGCTGGATCGCTGTAAAAAACTGATTGAAAAAGC 350
BSNT_03068 171 TCTCTCAGATAATTTTTAA 189
|||||||||||||||||||
BSU18490___rt 351 TCTCTCAGATAATTTTTAA 369
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