Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03060 and BSU18480

See DNA alignment / Visit BSNT_03060 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:30
# Commandline: needle
#    -asequence pep-align/BSNT_03060.1.22522.seq
#    -bsequence pep-align/BSU18480___proH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03060-BSU18480___proH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03060-BSU18480___proH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03060
# 2: BSU18480___proH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     156/297 (52.5%)
# Similarity:   156/297 (52.5%)
# Gaps:         139/297 (46.8%)
# Score: 770.0
# 
#
#=======================================

BSNT_03060         0 --------------------------------------------------      0
                                                                       
BSU18480___pr      1 MRTKKRTKEMLPIFDQKKVAFIGAGSMAEGMISGIVRANKIPKQNICVTN     50

BSNT_03060         0 --------------------------------------------------      0
                                                                       
BSU18480___pr     51 RSNTERLTELELQYGIKGALPNQLCIEDMDVLILAMKPKDAENALSSLKS    100

BSNT_03060         1 ---------------------------------------MIGASATAIAL     11
                                                            |||||||||||
BSU18480___pr    101 RIQPHQLILSVLAGITTSFIEQSLLNEQPVVRVMPNTSSMIGASATAIAL    150

BSNT_03060        12 GKYVSEDLKKLAEALLGCMGEVYTIQENQMDIFTGIAGSGPAYFYYLTEF     61
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU18480___pr    151 GKYVSEDLKKLAEALLGCMGEVYTIQENQMDIFTGIAGSGPAYFYYLMEF    200

BSNT_03060        62 IEKTGEEAGLDKQLSRSIGAQTLLGAAKMLMETGEHPEILRDNITSPNGT    111
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18480___pr    201 IEKTGEEAGLDKQLSRSIGAQTLLGAAKMLMETGEHPEILRDNITSPNGT    250

BSNT_03060       112 TAAGLQALKKSGGGEAISQAIKHAAKRSKEISEGIEKTAAPLSGVIK    158
                     |||||||||||||||||||||||||||||||||.|||||||||||||
BSU18480___pr    251 TAAGLQALKKSGGGEAISQAIKHAAKRSKEISEDIEKTAAPLSGVIK    297


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