Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03060 and BSU18480

See Amino acid alignment / Visit BSNT_03060 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:31
# Commandline: needle
#    -asequence dna-align/BSNT_03060.1.22522.seq
#    -bsequence dna-align/BSU18480___proH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03060-BSU18480___proH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03060-BSU18480___proH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03060
# 2: BSU18480___proH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 894
# Identity:     471/894 (52.7%)
# Similarity:   471/894 (52.7%)
# Gaps:         417/894 (46.6%)
# Score: 2331.0
# 
#
#=======================================

BSNT_03060         0 --------------------------------------------------      0
                                                                       
BSU18480___pr      1 ATGCGAACAAAAAAGCGAACAAAGGAGATGTTACCGATCTTTGATCAAAA     50

BSNT_03060         0 --------------------------------------------------      0
                                                                       
BSU18480___pr     51 GAAAGTAGCCTTTATAGGAGCAGGATCTATGGCGGAAGGAATGATATCAG    100

BSNT_03060         0 --------------------------------------------------      0
                                                                       
BSU18480___pr    101 GTATCGTTCGAGCCAACAAAATCCCGAAACAAAACATCTGCGTTACAAAC    150

BSNT_03060         0 --------------------------------------------------      0
                                                                       
BSU18480___pr    151 CGCAGCAATACAGAGCGATTAACTGAACTTGAACTTCAATATGGCATTAA    200

BSNT_03060         0 --------------------------------------------------      0
                                                                       
BSU18480___pr    201 AGGCGCCTTGCCGAACCAACTATGTATTGAAGACATGGATGTGCTCATTT    250

BSNT_03060         0 --------------------------------------------------      0
                                                                       
BSU18480___pr    251 TGGCAATGAAGCCAAAAGACGCCGAAAACGCTCTGTCATCACTAAAATCA    300

BSNT_03060         0 --------------------------------------------------      0
                                                                       
BSU18480___pr    301 CGTATTCAACCCCATCAATTAATATTGTCGGTCCTTGCCGGCATAACTAC    350

BSNT_03060         0 --------------------------------------------------      0
                                                                       
BSU18480___pr    351 CTCTTTTATTGAACAATCATTGCTTAATGAACAGCCGGTTGTCAGAGTGA    400

BSNT_03060         1 -----------------ATGATTGGCGCTTCTGCAACAGCTATTGCCCTT     33
                                      |||||||||||||||||||||||||||||||||
BSU18480___pr    401 TGCCCAACACTTCCAGTATGATTGGCGCTTCTGCAACAGCTATTGCCCTT    450

BSNT_03060        34 GGCAAATATGTGTCGGAAGACCTGAAGAAGCTGGCCGAAGCATTGCTCGG     83
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18480___pr    451 GGCAAATATGTGTCGGAAGACCTGAAGAAGCTGGCCGAAGCATTGCTCGG    500

BSNT_03060        84 ATGCATGGGCGAAGTCTATACAATCCAAGAAAATCAAATGGATATATTCA    133
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18480___pr    501 ATGCATGGGCGAAGTCTATACAATCCAAGAAAATCAAATGGATATATTCA    550

BSNT_03060       134 CCGGAATTGCAGGCAGCGGCCCCGCGTATTTTTATTATTTAACGGAATTC    183
                     |||||||||||||||||||.||||||||||||||||||||||.|||||||
BSU18480___pr    551 CCGGAATTGCAGGCAGCGGACCCGCGTATTTTTATTATTTAATGGAATTC    600

BSNT_03060       184 ATTGAAAAGACAGGCGAGGAAGCGGGCCTCGATAAACAGTTATCTCGAAG    233
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18480___pr    601 ATTGAAAAGACAGGCGAGGAAGCGGGCCTCGATAAACAGTTATCTCGAAG    650

BSNT_03060       234 CATCGGCGCACAGACACTTTTAGGTGCCGCAAAAATGCTCATGGAAACAG    283
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18480___pr    651 CATCGGCGCACAGACACTTTTAGGTGCCGCAAAAATGCTCATGGAAACAG    700

BSNT_03060       284 GAGAACATCCTGAGATCTTAAGAGATAATATCACGTCACCTAACGGAACG    333
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU18480___pr    701 GAGAACATCCTGAGATCTTAAGAGATAATATCACGTCACCGAACGGAACG    750

BSNT_03060       334 ACAGCAGCGGGGCTGCAAGCCTTGAAAAAAAGCGGCGGCGGAGAAGCGAT    383
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU18480___pr    751 ACAGCAGCGGGGCTGCAAGCCTTGAAAAAGAGCGGCGGCGGAGAAGCGAT    800

BSNT_03060       384 TTCTCAAGCGATAAAGCATGCGGCTAAGCGTTCAAAGGAAATCAGCGAAG    433
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU18480___pr    801 TTCTCAAGCAATAAAGCATGCGGCTAAGCGTTCAAAGGAAATCAGCGAAG    850

BSNT_03060       434 GTATCGAAAAAACTGCAGCGCCGCTATCAGGAGTGATAAAGTGA    477
                     .|||||||||||||||||||||||||||||||||||||||||||
BSU18480___pr    851 ATATCGAAAAAACTGCAGCGCCGCTATCAGGAGTGATAAAGTGA    894


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