Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02942 and BSU17770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:15
# Commandline: needle
# -asequence pep-align/BSNT_02942.1.22522.seq
# -bsequence pep-align/BSU17770___yndF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02942-BSU17770___yndF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02942-BSU17770___yndF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02942
# 2: BSU17770___yndF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 182/404 (45.0%)
# Similarity: 183/404 (45.3%)
# Gaps: 221/404 (54.7%)
# Score: 949.0
#
#
#=======================================
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 1 MKSKLKRQLPAMVIVCLLMICVTGCWSSREIEDLGLTFAIAIDKGKETNT 50
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 51 EKELKEEGGSYPKKDNITLTYQFVNEKAAGAGTSGGGGSGQGAQKAYINI 100
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 101 SETGDSLQQIGSEVALRRDREVFSPHLKVVVMSEDVLHTFPIDEMLDQFF 150
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 151 RDNEIRLSCLVLSAKGEARDALQLKENGEIPAFRLIGLGENEHKVSRILP 200
BSNT_02942 1 ---------------------MVAANGAVKYSGAAVINGKSKKMIGTLNE 29
:||||||||||||||||||||||||||||
BSU17770___yn 201 PMTLAKLIGKLHSGSSFLLQNVVAANGAVKYSGAAVINGKSKKMIGTLNE 250
BSNT_02942 30 YETEGITWIRGEGKGGVVKSHDKKSQQTLAYDINKIKSRIQPIVKGKDIS 79
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 251 YETEGITWIRGEGKGGVVKSHDKKSQQTLAYDINKIKSRIQPIVKGKDIS 300
BSNT_02942 80 FHVDIESEGDLVENWNTKEALDTQFIDRLETTIENEVKKIVGQVLKKIQH 129
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 301 FHVDIESEGDLVENWNTKEALDTQFIDRLETTIENEVKKIVGQVLKKIQH 350
BSNT_02942 130 DYKADVAGFDESFRLTYPHLWKRVKNNWDDTFSKADITYSVNVTITHFGT 179
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 351 DYKADVAGFDESFRLTYPHLWKRVKNNWDDTFSKADITYSVNVTITHFGT 400
BSNT_02942 180 VKTQ 183
||||
BSU17770___yn 401 VKTQ 404
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