Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02942 and BSU17770
See
Amino acid alignment /
Visit
BSNT_02942 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:15
# Commandline: needle
# -asequence dna-align/BSNT_02942.1.22522.seq
# -bsequence dna-align/BSU17770___yndF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02942-BSU17770___yndF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02942-BSU17770___yndF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02942
# 2: BSU17770___yndF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1215
# Identity: 552/1215 (45.4%)
# Similarity: 552/1215 (45.4%)
# Gaps: 663/1215 (54.6%)
# Score: 2760.0
#
#
#=======================================
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 1 GTGAAAAGTAAACTAAAACGTCAATTGCCTGCTATGGTCATAGTATGTCT 50
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 51 GCTGATGATTTGCGTAACAGGATGCTGGAGCAGTCGGGAAATAGAAGATC 100
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 101 TGGGTCTCACATTCGCTATCGCAATTGATAAAGGAAAAGAAACGAACACT 150
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 151 GAAAAAGAGTTAAAAGAAGAGGGCGGGAGCTATCCGAAAAAAGACAACAT 200
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 201 TACGCTGACCTATCAATTTGTTAATGAAAAAGCGGCAGGCGCGGGCACAA 250
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 251 GCGGGGGAGGCGGTAGCGGACAAGGAGCGCAAAAAGCGTACATTAATATA 300
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 301 AGTGAAACAGGGGATTCATTACAGCAGATCGGAAGTGAGGTTGCATTAAG 350
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 351 ACGGGACCGAGAAGTGTTTAGCCCGCATTTAAAAGTTGTTGTCATGAGTG 400
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 401 AAGATGTGCTGCACACATTTCCTATCGACGAAATGCTGGATCAATTTTTT 450
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 451 CGTGATAATGAAATCAGGCTGAGCTGTCTTGTTTTATCTGCTAAAGGGGA 500
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 501 AGCAAGAGACGCTCTCCAGCTGAAAGAGAACGGAGAAATTCCGGCATTTC 550
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 551 GGCTGATTGGATTAGGTGAAAATGAACATAAAGTTTCCAGAATTCTTCCC 600
BSNT_02942 0 -------------------------------------------------- 0
BSU17770___yn 601 CCTATGACACTCGCGAAACTAATTGGAAAACTGCATTCTGGCAGCAGCTT 650
BSNT_02942 1 -------------GTGGTTGCGGCGAATGGAGCGGTCAAGTATTCCGGAG 37
|||||||||||||||||||||||||||||||||||||
BSU17770___yn 651 TTTACTGCAAAATGTGGTTGCGGCGAATGGAGCGGTCAAGTATTCCGGAG 700
BSNT_02942 38 CAGCTGTAATCAACGGAAAATCGAAAAAAATGATAGGCACCTTAAATGAA 87
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 701 CAGCTGTAATCAACGGAAAATCGAAAAAAATGATAGGCACCTTAAATGAA 750
BSNT_02942 88 TATGAAACTGAGGGGATTACATGGATTAGAGGAGAAGGGAAAGGCGGAGT 137
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 751 TATGAAACTGAGGGGATTACATGGATTAGAGGAGAAGGGAAAGGCGGAGT 800
BSNT_02942 138 TGTCAAAAGTCATGATAAAAAGAGCCAACAGACGTTAGCGTACGATATCA 187
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 801 TGTCAAAAGTCATGATAAAAAGAGCCAACAGACGTTAGCGTACGATATCA 850
BSNT_02942 188 ATAAAATCAAAAGCAGAATTCAGCCAATCGTAAAAGGGAAAGATATTTCA 237
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 851 ATAAAATCAAAAGCAGAATTCAGCCAATCGTAAAAGGGAAAGATATTTCA 900
BSNT_02942 238 TTCCATGTCGATATTGAATCAGAAGGCGATTTGGTTGAAAACTGGAACAC 287
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 901 TTCCATGTCGATATTGAATCAGAAGGCGATTTGGTTGAAAACTGGAACAC 950
BSNT_02942 288 AAAAGAGGCGTTGGACACCCAGTTTATAGATCGTCTCGAAACGACTATTG 337
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 951 AAAAGAGGCGTTGGACACCCAGTTTATAGATCGTCTCGAAACGACTATTG 1000
BSNT_02942 338 AAAACGAGGTAAAGAAAATAGTTGGTCAGGTATTAAAAAAAATTCAGCAT 387
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 1001 AAAACGAGGTAAAGAAAATAGTTGGTCAGGTATTAAAAAAAATTCAGCAT 1050
BSNT_02942 388 GATTATAAAGCAGATGTTGCGGGTTTTGATGAATCTTTTAGACTTACATA 437
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 1051 GATTATAAAGCAGATGTTGCGGGTTTTGATGAATCTTTTAGACTTACATA 1100
BSNT_02942 438 TCCTCACTTATGGAAAAGGGTGAAAAATAACTGGGATGACACCTTCAGTA 487
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 1101 TCCTCACTTATGGAAAAGGGTGAAAAATAACTGGGATGACACCTTCAGTA 1150
BSNT_02942 488 AAGCCGACATCACATACAGTGTGAACGTCACAATTACTCATTTCGGCACG 537
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17770___yn 1151 AAGCCGACATCACATACAGTGTGAACGTCACAATTACTCATTTCGGCACG 1200
BSNT_02942 538 GTTAAAACTCAGTAA 552
|||||||||||||||
BSU17770___yn 1201 GTTAAAACTCAGTAA 1215
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.