Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02903 and BSU17590

See DNA alignment / Visit BSNT_02903 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:13
# Commandline: needle
#    -asequence pep-align/BSNT_02903___xylR.1.22522.seq
#    -bsequence pep-align/BSU17590___xylR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02903___xylR-BSU17590___xylR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02903___xylR-BSU17590___xylR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02903___xylR
# 2: BSU17590___xylR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity:     342/384 (89.1%)
# Similarity:   346/384 (90.1%)
# Gaps:          34/384 ( 8.9%)
# Score: 1767.0
# 
#
#=======================================

BSNT_02903___      1 MDIADQTFVKKVNQKLLLKEILKNSPISRAKLSEMTGLNKSTVSSQVNTL     50
                                                       ||||||||||||||||
BSU17590___xy      1 ----------------------------------MTGLNKSTVSSQVNTL     16

BSNT_02903___     51 MKENLVFEIGQGKSSGGRRPVMLVFNKKAGYSVGIDVGVDYINGILTDLE    100
                     |||::|||||||:|||||||||||||||||||||||||||||||||||||
BSU17590___xy     17 MKESMVFEIGQGQSSGGRRPVMLVFNKKAGYSVGIDVGVDYINGILTDLE     66

BSNT_02903___    101 GTIVLDQYCHLESNSPEITKDILIDMIHHFITHMPQSPYGLIGIGICVPG    150
                     ||||||||.|||||||||||||||||||||||.|||||||||||||||||
BSU17590___xy     67 GTIVLDQYRHLESNSPEITKDILIDMIHHFITQMPQSPYGLIGIGICVPG    116

BSNT_02903___    151 LIDKDQKIVFTPNSNWRDIDLKSSIQEKYNVPVFIENEANAGAYGEKVFG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17590___xy    117 LIDKDQKIVFTPNSNWRDIDLKSSIQEKYNVPVFIENEANAGAYGEKVFG    166

BSNT_02903___    201 AAKNHDNIIYVSISTGIGIGVIINNHLYRGVSGFSGEMGHMTIDFNGPKC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17590___xy    167 AAKNHDNIIYVSISTGIGIGVIINNHLYRGVSGFSGEMGHMTIDFNGPKC    216

BSNT_02903___    251 SCGNRGCWELYASEKALLTSLQTKAKKLSYQDIIDLAHLNDIGTLNALQN    300
                     ||||||||||||||||||.|||||.|||||||||:|||||||||||||||
BSU17590___xy    217 SCGNRGCWELYASEKALLKSLQTKEKKLSYQDIINLAHLNDIGTLNALQN    266

BSNT_02903___    301 FGFYLGIGLTNILNTFNPQAVILRNSIIESHPMVLNSMRSEVSSRVYSQL    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17590___xy    267 FGFYLGIGLTNILNTFNPQAVILRNSIIESHPMVLNSMRSEVSSRVYSQL    316

BSNT_02903___    351 GNSYELLPSSLGQNAPALGMSSIVIDHFLDMITM    384
                     ||||||||||||||||||||||||||||||||||
BSU17590___xy    317 GNSYELLPSSLGQNAPALGMSSIVIDHFLDMITM    350


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