Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02895 and BSU17540

See DNA alignment / Visit BSNT_02895 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:12
# Commandline: needle
#    -asequence pep-align/BSNT_02895.1.22522.seq
#    -bsequence pep-align/BSU17540___ynaF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02895-BSU17540___ynaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02895-BSU17540___ynaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02895
# 2: BSU17540___ynaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      49/117 (41.9%)
# Similarity:    50/117 (42.7%)
# Gaps:          65/117 (55.6%)
# Score: 248.0
# 
#
#=======================================

BSNT_02895         0 --------------------------------------------------      0
                                                                       
BSU17540___yn      1 MVLCDDERSAFLLVLDERLVDFDSQGGNHISVYLVTHFELSDQSYKDVLS     50

BSNT_02895         1 ---------------MDILSAKEEFDFDFPFNMLAIKSYVQELIKMLGID     35
                                    |||||.|||.|||||||||||||||||||||||||
BSU17540___yn     51 FNDDLLGMEHNCSYAMDILSVKEELDFDFPFNMLAIKSYVQELIKMLGID    100

BSNT_02895        36 ITLPEMKERDFDKLSQD     52
                     ||||||||||||||||:
BSU17540___yn    101 ITLPEMKERDFDKLSQN    117


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