Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02895 and BSU17540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:12
# Commandline: needle
# -asequence dna-align/BSNT_02895.1.22522.seq
# -bsequence dna-align/BSU17540___ynaF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02895-BSU17540___ynaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02895-BSU17540___ynaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02895
# 2: BSU17540___ynaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity: 154/354 (43.5%)
# Similarity: 154/354 (43.5%)
# Gaps: 195/354 (55.1%)
# Score: 750.0
#
#
#=======================================
BSNT_02895 0 -------------------------------------------------- 0
BSU17540___yn 1 ATGGTATTATGTGATGATGAGAGATCTGCATTTTTATTAGTACTTGATGA 50
BSNT_02895 0 -------------------------------------------------- 0
BSU17540___yn 51 AAGATTAGTGGATTTTGATTCTCAAGGTGGAAACCATATTAGTGTTTATT 100
BSNT_02895 0 -------------------------------------------------- 0
BSU17540___yn 101 TAGTTACTCACTTTGAGTTATCTGATCAATCGTATAAAGATGTATTAAGC 150
BSNT_02895 1 ---------------------------------------------ATGGA 5
|||||
BSU17540___yn 151 TTTAATGATGATCTTTTGGGTATGGAGCATAACTGTTCGTATGCAATGGA 200
BSNT_02895 6 TATTCTAAGCGCTAAAGAGGAATTTGATTTCGATTTCCCATTTAATATGC 55
|||||||||||.||||||||||.|||||||||||||||||||||||||||
BSU17540___yn 201 TATTCTAAGCGTTAAAGAGGAACTTGATTTCGATTTCCCATTTAATATGC 250
BSNT_02895 56 TTGCAATAAAAAGCTATGTACAAGAATTAATAAAAATGTTAGGGATTGAT 105
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17540___yn 251 TTGCAATAAAAAGCTATGTACAAGAATTAATAAAAATGTTAGGGATTGAT 300
BSNT_02895 106 ATAACTCTGCCTGAAATGAAAGAAAGAGATTTTGACAAACTTTCTCAAGA 155
||.|||||||||||||||||||||||||||||||||||||||||||||.|
BSU17540___yn 301 ATCACTCTGCCTGAAATGAAAGAAAGAGATTTTGACAAACTTTCTCAAAA 350
BSNT_02895 156 TTAA 159
.|||
BSU17540___yn 351 CTAA 354
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