Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02880 and BSU17510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence pep-align/BSNT_02880.1.22522.seq
# -bsequence pep-align/BSU17510___ynaC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02880-BSU17510___ynaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02880-BSU17510___ynaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02880
# 2: BSU17510___ynaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity: 84/264 (31.8%)
# Similarity: 85/264 (32.2%)
# Gaps: 176/264 (66.7%)
# Score: 432.0
#
#
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BSNT_02880 1 MTIYEQIKDALKNKINELVRPQEVKKTLQEKYGTNPDSIILSDYCYNRYN 50
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU17510___yn 1 MTIYEQIKDALKNKINELVSPQEVKKTLQEKYGTNPDSIILSDYCYNRYN 50
BSNT_02880 51 KGISFNKHLFEYVNRSSYKYLGENSLYTGLIFRKIKRGR----------- 89
||||||||||||:|||||||||||||||||||||.| |.
BSU17510___yn 51 KGISFNKHLFEYMNRSSYKYLGENSLYTGLIFRKSK-GEDKEVIVGEWVN 99
BSNT_02880 89 -------------------------------------------------- 89
BSU17510___yn 100 GVKSLREASVTNNQINDQAEIISKEQLVNLYNEYNQILRYEMNVLNCKPT 149
BSNT_02880 89 -------------------------------------------------- 89
BSU17510___yn 150 ELRHLIGRIGEFICAIQTNGTLARQTNQHGFDVVSDGRRISVKTTAQSSG 199
BSNT_02880 89 -------------------------------------------------- 89
BSU17510___yn 200 FISINKNTFYDFDDFFVVQYVNDDFKVIFFGSKEEVQKISRIYGSQYEVE 249
BSNT_02880 89 -------------- 89
BSU17510___yn 250 ISLLKKLNKEYQLN 263
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