Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02880 and BSU17510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_02880.1.22522.seq
# -bsequence dna-align/BSU17510___ynaC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02880-BSU17510___ynaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02880-BSU17510___ynaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02880
# 2: BSU17510___ynaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 793
# Identity: 265/793 (33.4%)
# Similarity: 265/793 (33.4%)
# Gaps: 524/793 (66.1%)
# Score: 1299.0
#
#
#=======================================
BSNT_02880 1 ATGACAATTTACGAGCAAATTAAAGATGCTTTGAAAAATAAGATCAATGA 50
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU17510___yn 1 ATGACAATTTACGAGCAAATTAAGGATGCTTTGAAAAATAAGATCAATGA 50
BSNT_02880 51 GTTGGTTAGACCTCAAGAAGTAAAGAAAACCCTTCAAGAAAAATACGGAA 100
|||||||..|||||||||||||||||||||||||||||||||||||||||
BSU17510___yn 51 GTTGGTTTCACCTCAAGAAGTAAAGAAAACCCTTCAAGAAAAATACGGAA 100
BSNT_02880 101 CTAATCCGGATAGCATTATTTTATCAGATTATTGTTATAACCGGTATAAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17510___yn 101 CTAATCCGGATAGCATTATTTTATCAGATTATTGTTATAACCGGTATAAT 150
BSNT_02880 151 AAGGGGATTTCTTTTAATAAGCACCTCTTTGAATATGTGAATAGAAGTTC 200
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU17510___yn 151 AAGGGGATTTCTTTTAATAAGCACCTCTTTGAATATATGAATAGAAGTTC 200
BSNT_02880 201 TTACAAATACTTAGGTGAAAACTCTCTTTATACAGGACTTATTTTCAGAA 250
|||||||||||||||||||||||||||||||||||||||||||||||| |
BSU17510___yn 201 TTACAAATACTTAGGTGAAAACTCTCTTTATACAGGACTTATTTTCAG-A 249
BSNT_02880 251 AAATCAAAAGGGGAAGATAA------------------------------ 270
||||||||||||||||||||
BSU17510___yn 250 AAATCAAAAGGGGAAGATAAGGAAGTTATCGTAGGCGAATGGGTAAACGG 299
BSNT_02880 270 -------------------------------------------------- 270
BSU17510___yn 300 TGTTAAATCACTCCGAGAAGCTTCTGTTACTAATAACCAAATAAATGATC 349
BSNT_02880 270 -------------------------------------------------- 270
BSU17510___yn 350 AAGCCGAAATCATTAGTAAAGAACAACTTGTAAACCTTTATAATGAATAT 399
BSNT_02880 270 -------------------------------------------------- 270
BSU17510___yn 400 AACCAAATCCTGAGATATGAAATGAATGTATTGAACTGTAAGCCTACAGA 449
BSNT_02880 270 -------------------------------------------------- 270
BSU17510___yn 450 ATTGAGGCATTTAATTGGCAGAATCGGTGAATTCATTTGTGCAATCCAAA 499
BSNT_02880 270 -------------------------------------------------- 270
BSU17510___yn 500 CCAACGGCACTCTGGCACGTCAAACTAATCAGCATGGATTTGATGTTGTG 549
BSNT_02880 270 -------------------------------------------------- 270
BSU17510___yn 550 AGTGATGGCAGACGGATTAGTGTAAAAACAACAGCTCAATCAAGTGGTTT 599
BSNT_02880 270 -------------------------------------------------- 270
BSU17510___yn 600 TATTTCGATAAATAAAAATACATTTTATGATTTTGATGATTTTTTTGTAG 649
BSNT_02880 270 -------------------------------------------------- 270
BSU17510___yn 650 TTCAATACGTAAATGATGATTTTAAAGTTATTTTCTTCGGCTCAAAGGAA 699
BSNT_02880 270 -------------------------------------------------- 270
BSU17510___yn 700 GAAGTGCAAAAAATAAGCAGAATTTATGGAAGCCAATACGAAGTTGAAAT 749
BSNT_02880 270 ------------------------------------------- 270
BSU17510___yn 750 TTCACTTCTTAAAAAGCTTAATAAGGAATACCAATTAAATTAA 792
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