Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02876 and BSU17480

See DNA alignment / Visit BSNT_02876 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_02876.1.22522.seq
#    -bsequence pep-align/BSU17480___ynzF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02876-BSU17480___ynzF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02876-BSU17480___ynzF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02876
# 2: BSU17480___ynzF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity:      47/181 (26.0%)
# Similarity:    58/181 (32.0%)
# Gaps:          85/181 (47.0%)
# Score: 144.5
# 
#
#=======================================

BSNT_02876         1 MWKALSQLLKKQKNQSPLDEGYIQIPEKD---------INQELKQVIFEL     41
                     |||||||||||||||||.||.||||||.:         ||.:|..||.:.
BSU17480___yn      1 MWKALSQLLKKQKNQSPSDEDYIQIPELEVKVLGMLHSINIDLVNVIAQA     50

BSNT_02876        42 ESLGEVVSK------KLQNKY---AGVFEAQDKPNLSIKVCRDIDGDVLN     82
                     |...|.:.:      .:.|::   |..||.:|...||    .|:|.... 
BSU17480___yn     51 EKSKEFIGQIEGIWHSIANQFYSLAQGFENEDINKLS----ADLDHAAA-     95

BSNT_02876        83 DFTAERCFEKEYRSQIAINYYQPAIVCDDEELDCFTMDLWYYYGGYKGTG    132
                       |.|....|  ..:...|.||.                           
BSU17480___yn     96 --TWEAVANK--AKEFVTNSYQG---------------------------    114

BSNT_02876       133 CGTLFDLNNNDLEKEIEEALIFLLNDKQFEK    163
                                                    
BSU17480___yn    114 -------------------------------    114


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