Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02678 and BSU16440

See DNA alignment / Visit BSNT_02678 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:53
# Commandline: needle
#    -asequence pep-align/BSNT_02678___cheW.1.22522.seq
#    -bsequence pep-align/BSU16440___cheW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02678___cheW-BSU16440___cheW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02678___cheW-BSU16440___cheW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02678___cheW
# 2: BSU16440___cheW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:     156/156 (100.0%)
# Similarity:   156/156 (100.0%)
# Gaps:           0/156 ( 0.0%)
# Score: 783.0
# 
#
#=======================================

BSNT_02678___      1 MTAEIKTGEKMIVFMVNGKEYAISVTQVKSIEKWQKPTRVPGVEPYICGV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16440___ch      1 MTAEIKTGEKMIVFMVNGKEYAISVTQVKSIEKWQKPTRVPGVEPYICGV     50

BSNT_02678___     51 INLRGVVTPVIDLRKRLNLPEYEITDETRIIIIAYRDIEVGWIVDEANDV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16440___ch     51 INLRGVVTPVIDLRKRLNLPEYEITDETRIIIIAYRDIEVGWIVDEANDV    100

BSNT_02678___    101 ITVHESEIESAPEGVQKDTDVSIEQIVKQENRLLNIIDANAVLDKESSQS    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16440___ch    101 ITVHESEIESAPEGVQKDTDVSIEQIVKQENRLLNIIDANAVLDKESSQS    150

BSNT_02678___    151 AVPDQA    156
                     ||||||
BSU16440___ch    151 AVPDQA    156


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.