Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02678 and BSU16440

See Amino acid alignment / Visit BSNT_02678 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:53
# Commandline: needle
#    -asequence dna-align/BSNT_02678___cheW.1.22522.seq
#    -bsequence dna-align/BSU16440___cheW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02678___cheW-BSU16440___cheW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02678___cheW-BSU16440___cheW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02678___cheW
# 2: BSU16440___cheW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 471
# Identity:     469/471 (99.6%)
# Similarity:   469/471 (99.6%)
# Gaps:           0/471 ( 0.0%)
# Score: 2337.0
# 
#
#=======================================

BSNT_02678___      1 ATGACTGCAGAAATTAAAACAGGCGAAAAAATGATAGTCTTTATGGTAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16440___ch      1 ATGACTGCAGAAATTAAAACAGGCGAAAAAATGATAGTCTTTATGGTAAA     50

BSNT_02678___     51 TGGCAAAGAATATGCCATTTCCGTCACTCAGGTGAAATCAATTGAAAAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16440___ch     51 TGGCAAAGAATATGCCATTTCCGTCACTCAGGTGAAATCAATTGAAAAAT    100

BSNT_02678___    101 GGCAAAAGCCAACGAGGGTACCTGGCGTCGAACCATATATTTGCGGGGTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16440___ch    101 GGCAAAAGCCAACGAGGGTACCTGGCGTCGAACCATATATTTGCGGGGTA    150

BSNT_02678___    151 ATCAATTTACGCGGGGTGGTGACTCCGGTTATTGATTTAAGAAAACGCCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16440___ch    151 ATCAATTTACGCGGGGTGGTGACTCCGGTTATTGATTTAAGAAAACGCCT    200

BSNT_02678___    201 GAATTTGCCAGAGTATGAAATTACCGATGAAACACGAATTATCATTATTG    250
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU16440___ch    201 GAATTTGCCAGAGTATGAAATTACAGATGAAACACGAATTATCATTATTG    250

BSNT_02678___    251 CTTATCGTGATATTGAAGTCGGCTGGATTGTGGATGAAGCGAACGATGTG    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU16440___ch    251 CTTATCGTGATATTGAAGTCGGCTGGATTGTGGATGAAGCGAATGATGTG    300

BSNT_02678___    301 ATTACCGTACACGAAAGTGAAATAGAATCTGCTCCAGAAGGCGTTCAGAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16440___ch    301 ATTACCGTACACGAAAGTGAAATAGAATCTGCTCCAGAAGGCGTTCAGAA    350

BSNT_02678___    351 AGATACGGATGTGTCGATCGAACAGATTGTGAAACAAGAGAACAGACTCT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16440___ch    351 AGATACGGATGTGTCGATCGAACAGATTGTGAAACAAGAGAACAGACTCT    400

BSNT_02678___    401 TAAATATTATTGATGCGAACGCGGTTTTGGATAAAGAATCATCTCAGTCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16440___ch    401 TAAATATTATTGATGCGAACGCGGTTTTGGATAAAGAATCATCTCAGTCC    450

BSNT_02678___    451 GCTGTGCCCGATCAAGCTTAA    471
                     |||||||||||||||||||||
BSU16440___ch    451 GCTGTGCCCGATCAAGCTTAA    471


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