Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02627 and BSU16080

See DNA alignment / Visit BSNT_02627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:46
# Commandline: needle
#    -asequence pep-align/BSNT_02627___ylqH.1.22522.seq
#    -bsequence pep-align/BSU16080___ylqH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02627___ylqH-BSU16080___ylqH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02627___ylqH-BSU16080___ylqH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02627___ylqH
# 2: BSU16080___ylqH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 93
# Identity:      93/93 (100.0%)
# Similarity:    93/93 (100.0%)
# Gaps:           0/93 ( 0.0%)
# Score: 469.0
# 
#
#=======================================

BSNT_02627___      1 MKEQTPIRKAVALHYDEQKDKAPRVIATGKGHVADNIIKEAKKAGVPIQE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16080___yl      1 MKEQTPIRKAVALHYDEQKDKAPRVIATGKGHVADNIIKEAKKAGVPIQE     50

BSNT_02627___     51 DRTLVELMRHLTVDDQIPEALYETVAEIFSFIYKLDESVKNKK     93
                     |||||||||||||||||||||||||||||||||||||||||||
BSU16080___yl     51 DRTLVELMRHLTVDDQIPEALYETVAEIFSFIYKLDESVKNKK     93


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.