Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02627 and BSU16080

See Amino acid alignment / Visit BSNT_02627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:46
# Commandline: needle
#    -asequence dna-align/BSNT_02627___ylqH.1.22522.seq
#    -bsequence dna-align/BSU16080___ylqH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02627___ylqH-BSU16080___ylqH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02627___ylqH-BSU16080___ylqH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02627___ylqH
# 2: BSU16080___ylqH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     280/282 (99.3%)
# Similarity:   280/282 (99.3%)
# Gaps:           0/282 ( 0.0%)
# Score: 1392.0
# 
#
#=======================================

BSNT_02627___      1 ATGAAAGAGCAGACACCGATCAGAAAAGCTGTTGCTCTCCATTATGACGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16080___yl      1 ATGAAAGAGCAGACACCGATCAGAAAAGCTGTTGCTCTCCATTATGACGA     50

BSNT_02627___     51 ACAAAAAGACAAGGCGCCGAGAGTGATTGCCACAGGGAAGGGCCATGTAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16080___yl     51 ACAAAAAGACAAGGCGCCGAGAGTGATTGCCACAGGGAAGGGCCATGTAG    100

BSNT_02627___    101 CTGACAACATTATCAAAGAAGCGAAAAAAGCAGGGGTCCCGATTCAAGAA    150
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU16080___yl    101 CTGACAACATTATAAAAGAAGCGAAAAAAGCAGGGGTCCCGATTCAAGAA    150

BSNT_02627___    151 GATCGGACCCTTGTCGAATTAATGCGCCATTTGACGGTAGATGATCAAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16080___yl    151 GATCGGACCCTTGTCGAATTAATGCGCCATTTGACGGTAGATGATCAAAT    200

BSNT_02627___    201 CCCTGAAGCTCTTTATGAAACGGTAGCCGAGATTTTTTCATTCATTTACA    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU16080___yl    201 TCCTGAAGCTCTTTATGAAACGGTAGCCGAGATTTTTTCATTCATTTACA    250

BSNT_02627___    251 AATTGGACGAAAGCGTAAAAAACAAAAAATAG    282
                     ||||||||||||||||||||||||||||||||
BSU16080___yl    251 AATTGGACGAAAGCGTAAAAAACAAAAAATAG    282


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