Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02620 and BSU16040

See DNA alignment / Visit BSNT_02620 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:45
# Commandline: needle
#    -asequence pep-align/BSNT_02620___rplS.1.22522.seq
#    -bsequence pep-align/BSU16040___rplS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02620___rplS-BSU16040___rplS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02620___rplS-BSU16040___rplS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02620___rplS
# 2: BSU16040___rplS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 118
# Identity:     115/118 (97.5%)
# Similarity:   115/118 (97.5%)
# Gaps:           3/118 ( 2.5%)
# Score: 577.0
# 
#
#=======================================

BSNT_02620___      1 ---MQKLIEDITKEQLRTDLPAFRPGDTLRVHVKVVEGNRERIQIFEGVV     47
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU16040___rp      1 MKTMQKLIEDITKEQLRTDLPAFRPGDTLRVHVKVVEGNRERIQIFEGVV     50

BSNT_02620___     48 IKRRGGGISETFTVRKISYGVGVERTFPVHTPKIAKIEVVRYGKVRRAKL     97
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16040___rp     51 IKRRGGGISETFTVRKISYGVGVERTFPVHTPKIAKIEVVRYGKVRRAKL    100

BSNT_02620___     98 YYLRELRGKAARIKEIRR    115
                     ||||||||||||||||||
BSU16040___rp    101 YYLRELRGKAARIKEIRR    118


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