Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02620 and BSU16040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:45
# Commandline: needle
# -asequence dna-align/BSNT_02620___rplS.1.22522.seq
# -bsequence dna-align/BSU16040___rplS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02620___rplS-BSU16040___rplS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02620___rplS-BSU16040___rplS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02620___rplS
# 2: BSU16040___rplS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity: 348/357 (97.5%)
# Similarity: 348/357 (97.5%)
# Gaps: 9/357 ( 2.5%)
# Score: 1740.0
#
#
#=======================================
BSNT_02620___ 1 ---------ATGCAAAAACTAATTGAAGATATCACAAAAGAACAGCTTCG 41
|||||||||||||||||||||||||||||||||||||||||
BSU16040___rp 1 TTGAAAACGATGCAAAAACTAATTGAAGATATCACAAAAGAACAGCTTCG 50
BSNT_02620___ 42 TACTGATCTTCCTGCGTTCCGTCCTGGTGACACTTTACGTGTACACGTTA 91
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16040___rp 51 TACTGATCTTCCTGCGTTCCGTCCTGGTGACACTTTACGTGTACACGTTA 100
BSNT_02620___ 92 AAGTTGTTGAGGGTAACCGTGAGCGTATCCAGATCTTTGAAGGTGTTGTG 141
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16040___rp 101 AAGTTGTTGAGGGTAACCGTGAGCGTATCCAGATCTTTGAAGGTGTTGTG 150
BSNT_02620___ 142 ATTAAGCGTCGTGGTGGTGGAATCAGCGAAACGTTCACAGTTCGTAAGAT 191
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16040___rp 151 ATTAAGCGTCGTGGTGGTGGAATCAGCGAAACGTTCACAGTTCGTAAGAT 200
BSNT_02620___ 192 TTCTTACGGTGTTGGCGTTGAACGTACTTTCCCAGTACACACACCAAAAA 241
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16040___rp 201 TTCTTACGGTGTTGGCGTTGAACGTACTTTCCCAGTACACACACCAAAAA 250
BSNT_02620___ 242 TCGCGAAAATCGAAGTTGTACGTTACGGTAAAGTACGCCGTGCTAAACTT 291
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16040___rp 251 TCGCGAAAATCGAAGTTGTACGTTACGGTAAAGTACGCCGTGCTAAACTT 300
BSNT_02620___ 292 TACTACCTGCGTGAACTTCGCGGAAAAGCGGCTCGTATTAAAGAGATCAG 341
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16040___rp 301 TACTACCTGCGTGAACTTCGCGGAAAAGCGGCTCGTATTAAAGAGATCAG 350
BSNT_02620___ 342 ACGATAA 348
|||||||
BSU16040___rp 351 ACGATAA 357
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