Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02617 and BSU16010

See DNA alignment / Visit BSNT_02617 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:45
# Commandline: needle
#    -asequence pep-align/BSNT_02617___ylqD.1.22522.seq
#    -bsequence pep-align/BSU16010___ylqD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02617___ylqD-BSU16010___ylqD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02617___ylqD-BSU16010___ylqD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02617___ylqD
# 2: BSU16010___ylqD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:     127/128 (99.2%)
# Similarity:   128/128 (100.0%)
# Gaps:           0/128 ( 0.0%)
# Score: 636.0
# 
#
#=======================================

BSNT_02617___      1 MQIIHRVAVMQVLTERSKEKLLASFAEKKQMLERECSQLYFQLRKHEKEQ     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16010___yl      1 MQIIHRVAVMQVLTERSKEKLLASFAEKKQMLERECSQLYFQLRKHEKEQ     50

BSNT_02617___     51 QNPDMIEQFKKAIEKRKDDIKIIDFQIAQVHTLPLGSELKEKEVDALLTI    100
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
BSU16010___yl     51 QNPNMIEQFKKAIEKRKDDIKIIDFQIAQVHTLPLGSELKEKEVDALLTI    100

BSNT_02617___    101 EAGDDWHEKTAANTIVIKDGKVIEIRQR    128
                     ||||||||||||||||||||||||||||
BSU16010___yl    101 EAGDDWHEKTAANTIVIKDGKVIEIRQR    128


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.