Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02617 and BSU16010

See Amino acid alignment / Visit BSNT_02617 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:45
# Commandline: needle
#    -asequence dna-align/BSNT_02617___ylqD.1.22522.seq
#    -bsequence dna-align/BSU16010___ylqD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02617___ylqD-BSU16010___ylqD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02617___ylqD-BSU16010___ylqD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02617___ylqD
# 2: BSU16010___ylqD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity:     381/387 (98.4%)
# Similarity:   381/387 (98.4%)
# Gaps:           0/387 ( 0.0%)
# Score: 1881.0
# 
#
#=======================================

BSNT_02617___      1 ATGCAAATTATTCACCGTGTAGCCGTTATGCAAGTCTTAACCGAGCGCAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16010___yl      1 ATGCAAATTATTCACCGTGTAGCCGTTATGCAAGTCTTAACCGAGCGCAG     50

BSNT_02617___     51 CAAAGAAAAGCTTTTAGCTTCTTTTGCCGAAAAGAAACAAATGCTTGAAC    100
                     .||||||||||||||||||||||||||.||.|||||||||||||||||||
BSU16010___yl     51 TAAAGAAAAGCTTTTAGCTTCTTTTGCTGAGAAGAAACAAATGCTTGAAC    100

BSNT_02617___    101 GAGAATGCAGCCAGCTCTATTTTCAGCTTAGAAAACATGAGAAAGAACAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16010___yl    101 GAGAATGCAGCCAGCTCTATTTTCAGCTTAGAAAACATGAGAAAGAACAG    150

BSNT_02617___    151 CAAAATCCTGATATGATTGAACAATTTAAAAAGGCAATAGAAAAGCGAAA    200
                     |||||.|||.||||||||||||||||||||||||||||||||||||||||
BSU16010___yl    151 CAAAACCCTAATATGATTGAACAATTTAAAAAGGCAATAGAAAAGCGAAA    200

BSNT_02617___    201 AGATGATATAAAAATCATCGATTTTCAAATTGCTCAAGTACATACATTGC    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU16010___yl    201 AGATGATATAAAAATCATTGATTTTCAAATTGCTCAAGTACATACATTGC    250

BSNT_02617___    251 CGCTTGGCAGTGAGTTGAAAGAAAAGGAAGTCGATGCGCTGCTGACGATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16010___yl    251 CGCTTGGCAGTGAGTTGAAAGAAAAGGAAGTCGATGCGCTGCTGACGATT    300

BSNT_02617___    301 GAAGCCGGGGATGACTGGCATGAGAAAACAGCAGCGAACACCATCGTCAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16010___yl    301 GAAGCCGGGGATGACTGGCATGAGAAAACAGCAGCGAACACCATCGTCAT    350

BSNT_02617___    351 AAAAGACGGAAAAGTAATTGAAATTCGCCAGAGGTGA    387
                     |||||||||||||||||||||||||||||||||||||
BSU16010___yl    351 AAAAGACGGAAAAGTAATTGAAATTCGCCAGAGGTGA    387


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