Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02538 and BSU15370

See DNA alignment / Visit BSNT_02538 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:30
# Commandline: needle
#    -asequence pep-align/BSNT_02538___ylmD.1.22522.seq
#    -bsequence pep-align/BSU15370___ylmD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02538___ylmD-BSU15370___ylmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02538___ylmD-BSU15370___ylmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02538___ylmD
# 2: BSU15370___ylmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     261/278 (93.9%)
# Similarity:   262/278 (94.2%)
# Gaps:          15/278 ( 5.4%)
# Score: 1369.0
# 
#
#=======================================

BSNT_02538___      1 ---------------MIQDWAQTNQNNKEVIAGFTTKNGGVSQKPFESLN     35
                                    |||||||||||||||||||||||||||||||||||
BSU15370___yl      1 MNTYHPFSLTTPSTLMIQDWAQTNQNNKEVIAGFTTKNGGVSQKPFESLN     50

BSNT_02538___     36 TGLHVHDKDADVVKNREYIADMFNTDLQSWVFADQTHDNRVQKVTQRDRG     85
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl     51 TGLHVHDKDADVVKNREYIADMFNTDLQSWVFADQTHDNRVQKVTQRDRG    100

BSNT_02538___     86 KGAREYHTALKATDGLYTNEKNVFLALCFADCVPLFFYDPVKSLVGVAHA    135
                     |||||||||||||||:||||||||||||||||||||||||||||||||||
BSU15370___yl    101 KGAREYHTALKATDGIYTNEKNVFLALCFADCVPLFFYDPVKSLVGVAHA    150

BSNT_02538___    136 GWKGTVKQIGREMVKQWTEKEGSNPSDIYAVIGPSISGACYTVDDRVMDA    185
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl    151 GWKGTVKQIGREMVKQWTEKEGSNPSDIYAVIGPSISGACYTVDDRVMDA    200

BSNT_02538___    186 VRALPVSADLAVNQTAKAQYQLDLKELNRLILMDSGLASEQISVSGLCTE    235
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU15370___yl    201 VRALPVSADLAANQTAKAQYQLDLKELNRLILMDSGLASEQISVSGLCTE    250

BSNT_02538___    236 SEPSLFYSHRRDQGKTGRMMSFIGMKEA    263
                     ||||||||||||||||||||||||||||
BSU15370___yl    251 SEPSLFYSHRRDQGKTGRMMSFIGMKEA    278


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