Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02538 and BSU15370
See
Amino acid alignment /
Visit
BSNT_02538 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:30
# Commandline: needle
# -asequence dna-align/BSNT_02538___ylmD.1.22522.seq
# -bsequence dna-align/BSU15370___ylmD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02538___ylmD-BSU15370___ylmD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02538___ylmD-BSU15370___ylmD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02538___ylmD
# 2: BSU15370___ylmD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 837
# Identity: 788/837 (94.1%)
# Similarity: 788/837 (94.1%)
# Gaps: 45/837 ( 5.4%)
# Score: 3924.0
#
#
#=======================================
BSNT_02538___ 1 ---------------------------------------------ATGAT 5
|||||
BSU15370___yl 1 ATGAATACATATCACCCATTCAGTCTTACCACACCCTCGACACTCATGAT 50
BSNT_02538___ 6 ACAAGACTGGGCTCAAACGAATCAAAACAACAAAGAGGTCATTGCCGGAT 55
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 51 ACAAGACTGGGCTCAAACGAATCAAAACAACAAAGAGGTCATTGCCGGAT 100
BSNT_02538___ 56 TTACGACAAAAAACGGCGGTGTCAGCCAAAAGCCTTTTGAATCGTTAAAT 105
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 101 TTACGACAAAAAACGGCGGTGTCAGCCAAAAGCCTTTTGAATCGTTAAAT 150
BSNT_02538___ 106 ACAGGATTGCACGTTCATGACAAAGATGCAGATGTAGTTAAAAATCGTGA 155
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 151 ACAGGATTGCACGTTCATGACAAAGATGCAGATGTAGTTAAAAATCGTGA 200
BSNT_02538___ 156 ATATATTGCCGATATGTTTAATACTGATTTGCAGTCTTGGGTATTCGCTG 205
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 201 ATATATTGCCGATATGTTTAATACTGATTTGCAGTCTTGGGTATTCGCTG 250
BSNT_02538___ 206 ATCAGACACATGATAATCGCGTTCAGAAAGTGACGCAGAGGGATAGGGGA 255
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 251 ATCAGACACATGATAATCGCGTTCAGAAAGTGACGCAGAGGGATAGGGGA 300
BSNT_02538___ 256 AAAGGCGCCCGTGAGTATCACACGGCTCTAAAAGCAACGGACGGGCTCTA 305
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU15370___yl 301 AAAGGCGCCCGTGAGTATCACACGGCTCTAAAAGCAACGGACGGGATCTA 350
BSNT_02538___ 306 TACAAATGAAAAAAATGTATTTTTAGCATTATGCTTTGCTGATTGTGTGC 355
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 351 TACAAATGAAAAAAATGTATTTTTAGCATTATGCTTTGCTGATTGTGTGC 400
BSNT_02538___ 356 CTCTTTTCTTTTATGATCCGGTTAAGTCGCTTGTCGGAGTCGCCCATGCC 405
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 401 CTCTTTTCTTTTATGATCCGGTTAAGTCGCTTGTCGGAGTCGCCCATGCC 450
BSNT_02538___ 406 GGGTGGAAAGGCACCGTCAAACAGATTGGCAGAGAAATGGTGAAGCAATG 455
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 451 GGGTGGAAAGGCACCGTCAAACAGATTGGCAGAGAAATGGTGAAGCAATG 500
BSNT_02538___ 456 GACTGAGAAGGAAGGTTCAAATCCCTCAGATATTTACGCTGTTATTGGCC 505
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 501 GACTGAGAAGGAAGGTTCAAATCCCTCAGATATTTACGCTGTTATTGGCC 550
BSNT_02538___ 506 CGTCTATCAGCGGAGCATGCTATACGGTAGACGACCGCGTCATGGATGCT 555
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 551 CGTCTATCAGCGGAGCATGCTATACGGTAGACGACCGCGTCATGGATGCT 600
BSNT_02538___ 556 GTCCGCGCATTGCCGGTTTCAGCAGACCTTGCCGTTAATCAGACGGCAAA 605
||||||||||||||||||||||||||||||||||..||||||||||||||
BSU15370___yl 601 GTCCGCGCATTGCCGGTTTCAGCAGACCTTGCCGCCAATCAGACGGCAAA 650
BSNT_02538___ 606 GGCACAATATCAGCTTGATCTGAAAGAGCTGAACCGTCTTATACTGATGG 655
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 651 GGCACAATATCAGCTTGATCTGAAAGAGCTGAACCGTCTTATACTGATGG 700
BSNT_02538___ 656 ACAGCGGTTTGGCAAGTGAACAAATTTCTGTCAGCGGTTTATGCACGGAA 705
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15370___yl 701 ACAGCGGTTTGGCAAGTGAACAAATTTCTGTCAGCGGTTTATGCACGGAA 750
BSNT_02538___ 706 AGCGAGCCGTCTCTTTTCTATTCTCACCGCCGCGATCAGGGGAAAACTGG 755
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU15370___yl 751 AGCGAGCCGTCTCTTTTCTATTCTCATCGCCGCGATCAGGGGAAAACTGG 800
BSNT_02538___ 756 ACGGATGATGTCCTTTATCGGAATGAAGGAGGCATAA 792
|||||||||||||||||||||||||||||||||||||
BSU15370___yl 801 ACGGATGATGTCCTTTATCGGAATGAAGGAGGCATAA 837
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.