Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02352 and BSU14040

See DNA alignment / Visit BSNT_02352 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:03
# Commandline: needle
#    -asequence pep-align/BSNT_02352___ykuD.1.22522.seq
#    -bsequence pep-align/BSU14040___ykuD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02352___ykuD-BSU14040___ykuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02352___ykuD-BSU14040___ykuD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02352___ykuD
# 2: BSU14040___ykuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:     162/167 (97.0%)
# Similarity:   163/167 (97.6%)
# Gaps:           3/167 ( 1.8%)
# Score: 837.0
# 
#
#=======================================

BSNT_02352___      1 MRKLLTYQVKQGDTLNSIAADFRISTAALLQANPSLQAGLTAGQSIVIPG     50
                        :||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk      1 ---MLTYQVKQGDTLNSIAADFRISTAALLQANPSLQAGLTAGQSIVIPG     47

BSNT_02352___     51 LPDPYTIPYHIAVSIGAKTLTLFLNNRVMKTYPIAVGKILTQTPTGEFYI    100
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU14040___yk     48 LPDPYTIPYHIAVSIGAKTLTLSLNNRVMKTYPIAVGKILTQTPTGEFYI     97

BSNT_02352___    101 INRQRNPGGPFGAYWLSLSKQHYGIHGTNNPASIGKAVSKGCIRMHNKDV    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk     98 INRQRNPGGPFGAYWLSLSKQHYGIHGTNNPASIGKAVSKGCIRMHNKDV    147

BSNT_02352___    151 IELASIVPNGTRVTINR    167
                     |||||||||||||||||
BSU14040___yk    148 IELASIVPNGTRVTINR    164


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