Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02352 and BSU14040
See
Amino acid alignment /
Visit
BSNT_02352 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:03
# Commandline: needle
# -asequence dna-align/BSNT_02352___ykuD.1.22522.seq
# -bsequence dna-align/BSU14040___ykuD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02352___ykuD-BSU14040___ykuD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02352___ykuD-BSU14040___ykuD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02352___ykuD
# 2: BSU14040___ykuD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity: 492/504 (97.6%)
# Similarity: 492/504 (97.6%)
# Gaps: 9/504 ( 1.8%)
# Score: 2448.0
#
#
#=======================================
BSNT_02352___ 1 ATGAGGAAACTGCTTACGTACCAGGTGAAGCAAGGTGATACACTGAACAG 50
|||||||||||||||||||||||||||||||||||||||||
BSU14040___yk 1 ---------CTGCTTACGTACCAGGTGAAGCAAGGTGATACACTGAACAG 41
BSNT_02352___ 51 CATCGCGGCTGATTTCAGAATCAGCACGGCTGCATTACTCCAGGCTAATC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk 42 CATCGCGGCTGATTTCAGAATCAGCACGGCTGCATTACTCCAGGCTAATC 91
BSNT_02352___ 101 CGTCACTGCAGGCAGGGCTCACCGCAGGACAGTCCATAGTCATCCCCGGA 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU14040___yk 92 CGTCACTGCAGGCAGGGCTCACCGCGGGACAGTCCATAGTCATCCCCGGA 141
BSNT_02352___ 151 CTGCCGGACCCTTATACAATTCCGTATCATATCGCAGTCTCAATCGGAGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk 142 CTGCCGGACCCTTATACAATTCCGTATCATATCGCAGTCTCAATCGGAGC 191
BSNT_02352___ 201 GAAGACCCTTACGCTGTTCCTAAATAATCGGGTAATGAAAACCTATCCCA 250
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU14040___yk 192 GAAGACCCTTACGCTGTCCCTAAATAATCGGGTAATGAAAACCTATCCCA 241
BSNT_02352___ 251 TCGCCGTTGGTAAAATACTAACGCAAACGCCTACTGGCGAGTTTTACATT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk 242 TCGCCGTTGGTAAAATACTAACGCAAACGCCTACTGGCGAGTTTTACATT 291
BSNT_02352___ 301 ATTAACCGCCAGCGCAATCCCGGCGGCCCATTTGGCGCTTATTGGCTGAG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk 292 ATTAACCGCCAGCGCAATCCCGGCGGCCCATTTGGCGCTTATTGGCTGAG 341
BSNT_02352___ 351 CCTTTCAAAGCAGCACTACGGAATACATGGGACGAATAATCCCGCTTCGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk 342 CCTTTCAAAGCAGCACTACGGAATACATGGGACGAATAATCCCGCTTCGA 391
BSNT_02352___ 401 TTGGTAAGGCTGTTTCTAAAGGCTGCATTCGCATGCATAACAAAGACGTG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk 392 TTGGTAAGGCTGTTTCTAAAGGCTGCATTCGCATGCATAACAAAGACGTG 441
BSNT_02352___ 451 ATCGAACTTGCTTCAATTGTGCCAAACGGAACAAGAGTCACGATTAACCG 500
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU14040___yk 442 ATCGAACTTGCTTCAATTGTGCCAAACGGAACGAGAGTCACGATTAACCG 491
BSNT_02352___ 501 GTAA 504
||||
BSU14040___yk 492 GTAA 495
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.