Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02352 and BSU14040

See Amino acid alignment / Visit BSNT_02352 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:03
# Commandline: needle
#    -asequence dna-align/BSNT_02352___ykuD.1.22522.seq
#    -bsequence dna-align/BSU14040___ykuD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02352___ykuD-BSU14040___ykuD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02352___ykuD-BSU14040___ykuD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02352___ykuD
# 2: BSU14040___ykuD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity:     492/504 (97.6%)
# Similarity:   492/504 (97.6%)
# Gaps:           9/504 ( 1.8%)
# Score: 2448.0
# 
#
#=======================================

BSNT_02352___      1 ATGAGGAAACTGCTTACGTACCAGGTGAAGCAAGGTGATACACTGAACAG     50
                              |||||||||||||||||||||||||||||||||||||||||
BSU14040___yk      1 ---------CTGCTTACGTACCAGGTGAAGCAAGGTGATACACTGAACAG     41

BSNT_02352___     51 CATCGCGGCTGATTTCAGAATCAGCACGGCTGCATTACTCCAGGCTAATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk     42 CATCGCGGCTGATTTCAGAATCAGCACGGCTGCATTACTCCAGGCTAATC     91

BSNT_02352___    101 CGTCACTGCAGGCAGGGCTCACCGCAGGACAGTCCATAGTCATCCCCGGA    150
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU14040___yk     92 CGTCACTGCAGGCAGGGCTCACCGCGGGACAGTCCATAGTCATCCCCGGA    141

BSNT_02352___    151 CTGCCGGACCCTTATACAATTCCGTATCATATCGCAGTCTCAATCGGAGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk    142 CTGCCGGACCCTTATACAATTCCGTATCATATCGCAGTCTCAATCGGAGC    191

BSNT_02352___    201 GAAGACCCTTACGCTGTTCCTAAATAATCGGGTAATGAAAACCTATCCCA    250
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU14040___yk    192 GAAGACCCTTACGCTGTCCCTAAATAATCGGGTAATGAAAACCTATCCCA    241

BSNT_02352___    251 TCGCCGTTGGTAAAATACTAACGCAAACGCCTACTGGCGAGTTTTACATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk    242 TCGCCGTTGGTAAAATACTAACGCAAACGCCTACTGGCGAGTTTTACATT    291

BSNT_02352___    301 ATTAACCGCCAGCGCAATCCCGGCGGCCCATTTGGCGCTTATTGGCTGAG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk    292 ATTAACCGCCAGCGCAATCCCGGCGGCCCATTTGGCGCTTATTGGCTGAG    341

BSNT_02352___    351 CCTTTCAAAGCAGCACTACGGAATACATGGGACGAATAATCCCGCTTCGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk    342 CCTTTCAAAGCAGCACTACGGAATACATGGGACGAATAATCCCGCTTCGA    391

BSNT_02352___    401 TTGGTAAGGCTGTTTCTAAAGGCTGCATTCGCATGCATAACAAAGACGTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14040___yk    392 TTGGTAAGGCTGTTTCTAAAGGCTGCATTCGCATGCATAACAAAGACGTG    441

BSNT_02352___    451 ATCGAACTTGCTTCAATTGTGCCAAACGGAACAAGAGTCACGATTAACCG    500
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU14040___yk    442 ATCGAACTTGCTTCAATTGTGCCAAACGGAACGAGAGTCACGATTAACCG    491

BSNT_02352___    501 GTAA    504
                     ||||
BSU14040___yk    492 GTAA    495


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