Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02340 and BSU13980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:01
# Commandline: needle
# -asequence pep-align/BSNT_02340___ykuA.1.22522.seq
# -bsequence pep-align/BSU13980___pbpH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02340___ykuA-BSU13980___pbpH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02340___ykuA-BSU13980___pbpH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02340___ykuA
# 2: BSU13980___pbpH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 706
# Identity: 653/706 (92.5%)
# Similarity: 666/706 (94.3%)
# Gaps: 21/706 ( 3.0%)
# Score: 3382.5
#
#
#=======================================
BSNT_02340___ 1 MTEIGREPKKKSKGNRAIRMNLFFLAVFVLFTALIFKLGVVQIVEGEQHE 50
|||||||||||||||||||||||||||||||
BSU13980___pb 1 -------------------MNLFFLAVFVLFTALIFKLGVVQIVEGEQHE 31
BSNT_02340___ 51 EDAEKSNAKTAYYPAPRGKMYDRNQKVAVDNQSVPEIVYVSTSSTKTEDK 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 32 EDAEKSNAKTAYYPAPRGKMYDRNQKVAVDNQSVPEIVYVSTSSTKTEDK 81
BSNT_02340___ 101 IKTAKRLASFIHIDTEFLKERDLRDYWIAAHPKKAAALLKESESNLKGDQ 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 82 IKTAKRLASFIHIDTEFLKERDLRDYWIAAHPKKAAALLKESESNLKGDQ 131
BSNT_02340___ 151 AYKLQIERVPDQELKAIQQDDEEMETAAIYTRFSSGNAYEPQIVKAMNPN 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 132 AYKLQIERVPDQELKAIQQDDEEMETAAIYTRFSSGNAYEPQIVKAMNPN 181
BSNT_02340___ 201 KSNSNGKNGALLDEKKNSSQRPKNDLTYDEISIVSEHLEELPGIDIVNDW 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 182 KSNSNGKNGALLDEKKNSSQRPKNDLTYDEISIVSEHLEELPGIDIVNDW 231
BSNT_02340___ 251 TRKYPYDKTLYSVFGGVTTPDQGLLSDRKDFYLTRGYANNDRVGKSYLEY 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 232 TRKYPYDKTLYSVFGGVTTPDQGLLSDRKDFYLTRGYANNDRVGKSYLEY 281
BSNT_02340___ 301 QYEEYLNSHKEKVEYVEDNKGNVVSQKTIDKGSRGYDLQLSFDMELQAKV 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 282 QYEEYLNSHKEKVEYVEDNKGNVVSQKTIDKGSRGYDLQLSFDMELQAKV 331
BSNT_02340___ 351 EKIIEEEVRNSRARGNYMLDRAFAVMMDPNNGDILSMAGKKIDLKTNKIE 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 332 EKIIEEEVRNSRARGNYMLDRAFAVMMDPNNGDILSMAGKKIDLKTNKIE 381
BSNT_02340___ 401 DYAIGAFTTQYEMGSAVKGATVLAGYQDGIPHYKYFVDTPLYLAGYGNKP 450
|||||||||||||||||||||||||||||||||||::|.|:.|. .|..
BSU13980___pb 382 DYAIGAFTTQYEMGSAVKGATVLAGYQDGIPHYKYYIDAPMLLG--TNLI 429
BSNT_02340___ 451 KKSYMNMGTINELTALQKSSNVYMFNVAMHIAGVTYKPHGPLPADQKDLN 500
||||.|||||||||||||||||||||||||||||||||||.|||||.||.
BSU13980___pb 430 KKSYTNMGTINELTALQKSSNVYMFNVAMHIAGVTYKPHGSLPADQNDLL 479
BSNT_02340___ 501 KMRNYYSQFGLGVKTGIDLPQESAGMQTTPDAVGGLILDLAIGQYDTYTP 550
||||||||||||||||||||||||||||||..||||||||||||||||||
BSU13980___pb 480 KMRNYYSQFGLGVKTGIDLPQESAGMQTTPKTVGGLILDLAIGQYDTYTP 529
BSNT_02340___ 551 LQMAQYISSIANGGYRIQPRIVTSVHEPSKKEGLGKTIEQRKPNILNKIN 600
||||||||.|||||||:|||||||:|:|.||:.|||.||.|||.:|||||
BSU13980___pb 530 LQMAQYISVIANGGYRVQPRIVTSIHKPGKKDQLGKAIEHRKPKVLNKIN 579
BSNT_02340___ 601 NSESDIQQVKTGMKLVTTSGTAKNTFTEDVSGKTGTAETFYYGTNRNWWG 650
|||||::||:|||||||:||||||||||||||||||||||||||||||||
BSU13980___pb 580 NSESDLKQVQTGMKLVTSSGTAKNTFTEDVSGKTGTAETFYYGTNRNWWG 629
BSNT_02340___ 651 KKTYNLTFVGYYPSKNPKVAFSVVVPSVNDDDKINKIIAKRAIHAYAELE 700
|||||||||||||||.||||||||||||:|||||||||||||||||||||
BSU13980___pb 630 KKTYNLTFVGYYPSKKPKVAFSVVVPSVDDDDKINKIIAKRAIHAYAELE 679
BSNT_02340___ 701 KKHSKK 706
||||||
BSU13980___pb 680 KKHSKK 685
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