Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02340 and BSU13980
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:01
# Commandline: needle
# -asequence dna-align/BSNT_02340___ykuA.1.22522.seq
# -bsequence dna-align/BSU13980___pbpH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02340___ykuA-BSU13980___pbpH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02340___ykuA-BSU13980___pbpH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02340___ykuA
# 2: BSU13980___pbpH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2127
# Identity: 1941/2127 (91.3%)
# Similarity: 1941/2127 (91.3%)
# Gaps: 75/2127 ( 3.5%)
# Score: 9214.0
#
#
#=======================================
BSNT_02340___ 1 GTGACTGAAATAGGACGTGAACCAAAGAAAAAGAGCAAAGGAAACAGAGC 50
BSU13980___pb 0 -------------------------------------------------- 0
BSNT_02340___ 51 AATCAGAATGAACCTTTTTTTCCTAGCTGTCTTTGTTCTATTCACTGCAT 100
|||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 1 -------ATGAACCTTTTTTTCCTAGCTGTCTTTGTTCTATTCACTGCAT 43
BSNT_02340___ 101 TAATTTTTAAGCTCGGGGTTGTTCAAATTGTTGAAGGCGAACAGCATGAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 44 TAATTTTTAAGCTCGGGGTTGTTCAAATTGTTGAAGGCGAACAGCATGAA 93
BSNT_02340___ 151 GAAGACGCTGAGAAATCAAATGCAAAAACAGCTTACTATCCTGCGCCTCG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 94 GAAGACGCTGAGAAATCAAATGCAAAAACAGCTTACTATCCTGCGCCTCG 143
BSNT_02340___ 201 CGGGAAGATGTACGACAGAAATCAGAAAGTTGCTGTCGACAACCAGAGCG 250
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU13980___pb 144 CGGGAAGATGTACGACAGAAACCAGAAAGTTGCTGTCGACAACCAGAGCG 193
BSNT_02340___ 251 TTCCAGAAATTGTGTATGTATCAACATCTAGCACAAAAACAGAAGATAAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 194 TTCCAGAAATTGTGTATGTATCAACATCTAGCACAAAAACAGAAGATAAA 243
BSNT_02340___ 301 ATCAAAACAGCGAAGCGGCTTGCTTCTTTCATTCATATTGATACCGAATT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 244 ATCAAAACAGCGAAGCGGCTTGCTTCTTTCATTCATATTGATACCGAATT 293
BSNT_02340___ 351 TTTGAAGGAAAGGGATCTTCGTGATTACTGGATCGCAGCTCATCCGAAAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 294 TTTGAAGGAAAGGGATCTTCGTGATTACTGGATCGCAGCTCATCCGAAAA 343
BSNT_02340___ 401 AAGCCGCCGCTCTGCTTAAGGAATCAGAAAGCAATCTGAAAGGAGACCAG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 344 AAGCCGCCGCTCTGCTTAAGGAATCAGAAAGCAATCTGAAAGGAGACCAG 393
BSNT_02340___ 451 GCTTACAAGCTTCAAATAGAGCGTGTTCCGGATCAAGAATTAAAGGCTAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 394 GCTTACAAGCTTCAAATAGAGCGTGTTCCGGATCAAGAATTAAAGGCTAT 443
BSNT_02340___ 501 TCAGCAAGATGACGAAGAAATGGAAACTGCTGCGATATATACAAGGTTTT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 444 TCAGCAAGATGACGAAGAAATGGAAACTGCTGCGATATATACAAGGTTTT 493
BSNT_02340___ 551 CAAGCGGAAATGCTTACGAACCTCAAATCGTAAAGGCAATGAATCCAAAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 494 CAAGCGGAAATGCTTACGAACCTCAAATCGTAAAGGCAATGAATCCAAAT 543
BSNT_02340___ 601 AAGAGCAATAGCAATGGAAAAAACGGAGCGCTGCTTGATGAGAAGAAAAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 544 AAGAGCAATAGCAATGGAAAAAACGGAGCGCTGCTTGATGAGAAGAAAAA 593
BSNT_02340___ 651 CTCCTCGCAAAGACCAAAAAATGACTTAACATATGATGAAATTTCCATTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 594 CTCCTCGCAAAGACCAAAAAATGACTTAACATATGATGAAATTTCCATTG 643
BSNT_02340___ 701 TTTCTGAGCATTTAGAAGAACTTCCGGGAATCGATATCGTAAACGATTGG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 644 TTTCTGAGCATTTAGAAGAACTTCCGGGAATCGATATCGTAAACGATTGG 693
BSNT_02340___ 751 ACACGAAAATATCCTTATGACAAAACCCTTTATTCTGTTTTCGGGGGCGT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 694 ACACGAAAATATCCTTATGACAAAACCCTTTATTCTGTTTTCGGGGGCGT 743
BSNT_02340___ 801 CACGACACCTGATCAGGGCCTGCTGAGCGACCGGAAAGATTTCTACTTAA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 744 CACGACACCTGATCAGGGCCTGCTGAGCGACCGGAAAGATTTCTACTTAA 793
BSNT_02340___ 851 CAAGAGGCTATGCGAATAATGACAGGGTGGGAAAAAGTTATTTAGAGTAT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 794 CAAGAGGCTATGCGAATAATGACAGGGTGGGAAAAAGTTATTTAGAGTAT 843
BSNT_02340___ 901 CAATATGAAGAATATTTAAATTCGCATAAAGAAAAAGTGGAATACGTAGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 844 CAATATGAAGAATATTTAAATTCGCATAAAGAAAAAGTGGAATACGTAGA 893
BSNT_02340___ 951 AGATAATAAAGGAAATGTCGTCAGCCAAAAAACCATTGATAAGGGCAGCA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 894 AGATAATAAAGGAAATGTCGTCAGCCAAAAAACCATTGATAAGGGCAGCA 943
BSNT_02340___ 1001 GGGGATACGATCTTCAGCTTTCTTTTGACATGGAGCTTCAGGCAAAGGTA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 944 GGGGATACGATCTTCAGCTTTCTTTTGACATGGAGCTTCAGGCAAAGGTA 993
BSNT_02340___ 1051 GAAAAGATCATTGAAGAAGAAGTAAGAAACAGCCGTGCACGCGGAAATTA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 994 GAAAAGATCATTGAAGAAGAAGTAAGAAACAGCCGTGCACGCGGAAATTA 1043
BSNT_02340___ 1101 CATGCTTGACAGAGCCTTTGCCGTAATGATGGACCCGAATAACGGCGATA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 1044 CATGCTTGACAGAGCCTTTGCCGTAATGATGGACCCGAATAACGGCGATA 1093
BSNT_02340___ 1151 TTTTATCAATGGCAGGGAAAAAGATAGATTTAAAAACCAACAAAATTGAA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 1094 TTTTATCAATGGCAGGGAAAAAGATAGATTTAAAAACCAACAAAATTGAA 1143
BSNT_02340___ 1201 GATTATGCGATAGGGGCATTTACCACCCAATATGAAATGGGATCAGCAGT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 1144 GATTATGCGATAGGGGCATTTACCACCCAATATGAAATGGGATCAGCAGT 1193
BSNT_02340___ 1251 AAAGGGGGCCACCGTGCTAGCCGGCTATCAGGACGGAATCCCGCATTATA 1300
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU13980___pb 1194 AAAGGGGGCCACCGTGCTAGCCGGCTATCAGGACGGGATCCCGCATTATA 1243
BSNT_02340___ 1301 AATATTTTGTTGATACACCTCTTTATTTAGCAGGATACGGTAACAAACC- 1349
||||||.|.|.|||.|.||..|...|||| |.|||.||.|
BSU13980___pb 1244 AATATTATATCGATGCTCCAATGCTTTTA----------GGAACGAATCT 1283
BSNT_02340___ 1350 ---GAAGAAATCCTACATGAACATGGGAACCATCAATGAATTAACCGCTC 1396
.||.|||||.||.|..||.||||||||||||||||||||||||||..
BSU13980___pb 1284 TATAAAAAAATCTTATACTAATATGGGAACCATCAATGAATTAACCGCAT 1333
BSNT_02340___ 1397 TGCAAAAAAGTTCAAACGTATATATGTTTAATGTTGCCATGCACATTGCC 1446
||||||||||||||||||||||||||||.||||||||||||||.|||||.
BSU13980___pb 1334 TGCAAAAAAGTTCAAACGTATATATGTTCAATGTTGCCATGCATATTGCA 1383
BSNT_02340___ 1447 GGTGTCACATACAAGCCGCATGGACCTCTTCCTGCTGACCAGAAGGATTT 1496
||.||.||||||||||||||||||.||||.||.|||||.|||||.|||.|
BSU13980___pb 1384 GGCGTAACATACAAGCCGCATGGATCTCTCCCGGCTGATCAGAACGATCT 1433
BSNT_02340___ 1497 AAACAAAATGAGAAATTACTACAGCCAATTTGGCCTGGGAGTAAAGACAG 1546
|...|||||||||||.||.||||||||.|||||.||||||||||||||||
BSU13980___pb 1434 ACTGAAAATGAGAAACTATTACAGCCAGTTTGGTCTGGGAGTAAAGACAG 1483
BSNT_02340___ 1547 GTATCGATCTTCCGCAGGAATCAGCCGGAATGCAAACTACACCTGATGCG 1596
||||.|||||.||||||||||||||||||||||||||.||||||.|..|.
BSU13980___pb 1484 GTATTGATCTCCCGCAGGAATCAGCCGGAATGCAAACCACACCTAAAACT 1533
BSNT_02340___ 1597 GTAGGGGGGTTAATTTTAGACTTGGCCATTGGACAATACGATACATATAC 1646
|||||.||.||||||||||||||.||.|||||.||||||||||||||.||
BSU13980___pb 1534 GTAGGAGGATTAATTTTAGACTTAGCAATTGGCCAATACGATACATACAC 1583
BSNT_02340___ 1647 ACCGCTTCAAATGGCACAGTACATCTCATCAATTGCCAATGGGGGGTACC 1696
|||||||||||||||.||.|||||||||..|||.||||||||.||.||.|
BSU13980___pb 1584 ACCGCTTCAAATGGCTCAATACATCTCAGTAATCGCCAATGGTGGCTATC 1633
BSNT_02340___ 1697 GCATTCAGCCAAGAATTGTTACAAGTGTTCATGAGCCCAGCAAAAAAGA- 1745
|..|||||||.|||||.||.||||||.|||||.||||..|.||||||||
BSU13980___pb 1634 GTGTTCAGCCTAGAATCGTCACAAGTATTCATAAGCCAGGAAAAAAAGAC 1683
BSNT_02340___ 1746 -AGGCCTTGGGAAGACCATTGAACAAAGAAAGCCAAACATTCTCAACAAA 1794
|| ||.||.|||.|.||||||||.||.||.||.||..|.|||||.||.
BSU13980___pb 1684 CAG--CTGGGTAAGGCGATTGAACATAGGAAACCTAAAGTACTCAATAAG 1731
BSNT_02340___ 1795 ATTAACAACTCAGAAAGTGACATTCAGCAGGTGAAGACTGGAATGAAGCT 1844
|||||.||.|||||.||.||..|..|.||.||..|.||.||.|||||..|
BSU13980___pb 1732 ATTAATAATTCAGAGAGCGATTTGAAACAAGTACAAACAGGCATGAAATT 1781
BSNT_02340___ 1845 AGTTACCACTTCAGGGACAGCTAAAAATACGTTTACAGAAGATGTATCAG 1894
|||.||..|||||||||||||.||||||||||||||||||||||||||||
BSU13980___pb 1782 AGTCACTTCTTCAGGGACAGCAAAAAATACGTTTACAGAAGATGTATCAG 1831
BSNT_02340___ 1895 GGAAAACGGGAACAGCGGAAACATTTTACTACGGCACGAATCGCAACTGG 1944
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 1832 GGAAAACGGGAACAGCGGAAACATTTTACTACGGCACGAATCGCAACTGG 1881
BSNT_02340___ 1945 TGGGGGAAAAAAACATACAATCTGACTTTTGTCGGCTATTACCCATCGAA 1994
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU13980___pb 1882 TGGGGGAAAAAAACATACAATCTGACTTTTGTCGGCTATTACCCGTCGAA 1931
BSNT_02340___ 1995 AAATCCAAAAGTGGCTTTTAGTGTTGTTGTTCCATCAGTAAATGATGATG 2044
|||.|||||||||||.||||||||||||||||||||||||.|||||||||
BSU13980___pb 1932 AAAACCAAAAGTGGCCTTTAGTGTTGTTGTTCCATCAGTAGATGATGATG 1981
BSNT_02340___ 2045 ATAAGATCAATAAAATTATTGCCAAAAGAGCTATCCACGCCTACGCAGAG 2094
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13980___pb 1982 ATAAGATCAATAAAATTATTGCCAAAAGAGCTATCCACGCCTACGCAGAG 2031
BSNT_02340___ 2095 CTCGAAAAAAAACACAGTAAAAAATAA 2121
|||||||||||||||||||||||||||
BSU13980___pb 2032 CTCGAAAAAAAACACAGTAAAAAATAA 2058
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