Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02251 and BSU13400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:50
# Commandline: needle
# -asequence pep-align/BSNT_02251___ligD.1.22522.seq
# -bsequence pep-align/BSU13400___ykoU.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02251___ligD-BSU13400___ykoU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02251___ligD-BSU13400___ykoU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02251___ligD
# 2: BSU13400___ykoU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 611
# Identity: 561/611 (91.8%)
# Similarity: 562/611 (92.0%)
# Gaps: 46/611 ( 7.5%)
# Score: 2962.0
#
#
#=======================================
BSNT_02251___ 1 ----------------------------------------------MELS 4
:|||
BSU13400___yk 1 MAFTMQPVLTSSPPIGAEWRYEVKYDGYRCILRIHSSGVTLTSRNGVELS 50
BSNT_02251___ 5 STFPEITQFAKTAFQHLEKELPLTLDGEIVCLVNPCRADFEHLQVRGRLK 54
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 51 STFPEITQFAKTAFQHLEKELPLTLDGEIVCLVNPCRADFEHLQVRGRLK 100
BSNT_02251___ 55 RPDKIQESANARPCCFLAFDLLERSGEDVTLLSYLDRKKSLRELISAAKL 104
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 101 RPDKIQESANARPCCFLAFDLLERSGEDVTLLSYLDRKKSLRELISAAKL 150
BSNT_02251___ 105 PASPDPYAKETIQSIPCYDHFDQLWEMVIKYDGEGIVAKKTNSKWLEKKR 154
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 151 PASPDPYAKETIQSIPCYDHFDQLWEMVIKYDGEGIVAKKTNSKWLEKKR 200
BSNT_02251___ 155 SSDWLKYKNFKQAYVCITGFNPNNGFLTVSVLKNGIMTPIASVSHGMRDE 204
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 201 SSDWLKYKNFKQAYVCITGFNPNNGFLTVSVLKNGIMTPIASVSHGMRDE 250
BSNT_02251___ 205 EKSAIREIMEQHGHQTPSGEFKLEPSICAAVQYLTILHGTLREVSFIGFE 254
|||||||||||||||||||||.|||||||||||||||.||||||||||||
BSU13400___yk 251 EKSAIREIMEQHGHQTPSGEFTLEPSICAAVQYLTILQGTLREVSFIGFE 300
BSNT_02251___ 255 FQMDWTECTYAQVIRHSKPVHPKLQFTSLDKIIFEKNKKTKEDFIQYMIE 304
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 301 FQMDWTECTYAQVIRHSKPVHPKLQFTSLDKIIFEKNKKTKEDFIQYMIE 350
BSNT_02251___ 305 VSDYLLPFLKNRAVTVIRYPHGSRSESFFQKNKPDYAPDFVQSFYDGSHE 354
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 351 VSDYLLPFLKNRAVTVIRYPHGSRSESFFQKNKPDYAPDFVQSFYDGSHE 400
BSNT_02251___ 355 HIVCEDMSTLLWLCNQLALEFHVPFQTIKSRRPAEIVIDLDPPSRDDFLM 404
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 401 HIVCEDMSTLLWLCNQLALEFHVPFQTIKSRRPAEIVIDLDPPSRDDFLM 450
BSNT_02251___ 405 AVQAANELKRLLDSFGITSYPKLSGNKGIQLYIPLSPEAFTYEETRQFTQ 454
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 451 AVQAANELKRLLDSFGITSYPKLSGNKGIQLYIPLSPEAFTYEETRQFTQ 500
BSNT_02251___ 455 LIAEYCTNAFPELFTTERLIKNRHGKLYLDYLQHAEGKTIICPYSTRGNE 504
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU13400___yk 501 LIAEYCTNAFPELFTTERLIKNRHCKLYLDYLQHAEGKTIICPYSTRGNE 550
BSNT_02251___ 505 LGTVAAPLYWHEVQSSLTPALFTIDTVIDRIKKQGCPFFDFYRNPQDEPL 554
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 551 LGTVAAPLYWHEVQSSLTPALFTIDTVIDRIKKQGCPFFDFYRNPQDEPL 600
BSNT_02251___ 555 SAILHQLKKKS 565
|||||||||||
BSU13400___yk 601 SAILHQLKKKS 611
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