Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02251 and BSU13400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:51
# Commandline: needle
# -asequence dna-align/BSNT_02251___ligD.1.22522.seq
# -bsequence dna-align/BSU13400___ykoU.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02251___ligD-BSU13400___ykoU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02251___ligD-BSU13400___ykoU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02251___ligD
# 2: BSU13400___ykoU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1836
# Identity: 1689/1836 (92.0%)
# Similarity: 1689/1836 (92.0%)
# Gaps: 138/1836 ( 7.5%)
# Score: 8409.0
#
#
#=======================================
BSNT_02251___ 0 -------------------------------------------------- 0
BSU13400___yk 1 ATGGCGTTTACCATGCAGCCGGTCTTAACTTCGTCACCGCCAATCGGAGC 50
BSNT_02251___ 0 -------------------------------------------------- 0
BSU13400___yk 51 AGAATGGCGTTACGAAGTAAAATATGATGGGTACCGCTGTATTCTCCGCA 100
BSNT_02251___ 1 --------------------------------------GTGGAGCTCAGC 12
||||||||||||
BSU13400___yk 101 TCCATTCTTCAGGTGTGACCTTAACCAGCAGAAATGGTGTGGAGCTCAGC 150
BSNT_02251___ 13 AGCACCTTCCCTGAAATCACACAATTCGCCAAAACTGCCTTTCAGCACCT 62
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 151 AGCACCTTCCCTGAAATCACACAATTCGCCAAAACTGCCTTTCAGCACCT 200
BSNT_02251___ 63 AGAAAAAGAGCTTCCGCTGACACTTGACGGTGAAATCGTATGTTTGGTGA 112
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 201 AGAAAAAGAGCTTCCGCTGACACTTGACGGTGAAATCGTATGTTTGGTGA 250
BSNT_02251___ 113 ATCCCTGTCGTGCAGATTTTGAACACCTTCAAGTGCGGGGGCGTTTGAAA 162
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 251 ATCCCTGTCGTGCAGATTTTGAACACCTTCAAGTGCGGGGGCGTTTGAAA 300
BSNT_02251___ 163 AGGCCAGACAAGATTCAGGAATCGGCAAACGCGCGGCCGTGCTGCTTTCT 212
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 301 AGGCCAGACAAGATTCAGGAATCGGCAAACGCGCGGCCGTGCTGCTTTCT 350
BSNT_02251___ 213 CGCCTTTGATTTGTTAGAGCGAAGCGGAGAAGATGTAACGCTTCTTTCGT 262
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 351 CGCCTTTGATTTGTTAGAGCGAAGCGGAGAAGATGTAACGCTTCTTTCGT 400
BSNT_02251___ 263 ATTTGGACCGCAAAAAATCGCTGCGTGAACTCATATCCGCAGCAAAGCTT 312
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 401 ATTTGGACCGCAAAAAATCGCTGCGTGAACTCATATCCGCAGCAAAGCTT 450
BSNT_02251___ 313 CCTGCATCTCCAGATCCTTACGCAAAAGAAACCATTCAATCCATTCCCTG 362
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 451 CCTGCATCTCCAGATCCTTACGCAAAAGAAACCATTCAATCCATTCCCTG 500
BSNT_02251___ 363 TTATGATCATTTTGATCAACTCTGGGAGATGGTAATAAAATATGACGGAG 412
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 501 TTATGATCATTTTGATCAACTCTGGGAGATGGTAATAAAATATGACGGAG 550
BSNT_02251___ 413 AAGGAATTGTAGCGAAGAAAACAAACAGCAAATGGCTTGAAAAGAAGCGG 462
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 551 AAGGAATTGTAGCGAAGAAAACAAACAGCAAATGGCTTGAAAAGAAGCGG 600
BSNT_02251___ 463 TCGTCCGATTGGCTCAAATATAAAAACTTTAAACAAGCTTATGTTTGCAT 512
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 601 TCGTCCGATTGGCTCAAATATAAAAACTTTAAACAAGCTTATGTTTGCAT 650
BSNT_02251___ 513 AACAGGGTTCAACCCTAACAACGGGTTTCTGACGGTATCGGTGTTAAAAA 562
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 651 AACAGGGTTCAACCCTAACAACGGGTTTCTGACGGTATCGGTGTTAAAAA 700
BSNT_02251___ 563 ACGGAATAATGACACCGATTGCCTCTGTCTCGCACGGAATGCGCGATGAG 612
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU13400___yk 701 ACGGAATAATGACACCGATTGCCTCTGTCTCGCACGGAATGCGTGATGAG 750
BSNT_02251___ 613 GAAAAAAGCGCTATACGCGAGATTATGGAACAGCACGGACATCAAACACC 662
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 751 GAAAAAAGCGCTATACGCGAGATTATGGAACAGCACGGACATCAAACACC 800
BSNT_02251___ 663 CTCAGGCGAGTTTAAGCTTGAACCTTCGATTTGTGCAGCTGTTCAATACT 712
|||||||||.||||.|||||||||||||||||||||||||||||||||||
BSU13400___yk 801 CTCAGGCGAATTTACGCTTGAACCTTCGATTTGTGCAGCTGTTCAATACT 850
BSNT_02251___ 713 TAACAATTCTCCATGGCACATTAAGAGAGGTATCGTTTATCGGTTTCGAA 762
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU13400___yk 851 TAACAATTCTCCAAGGCACATTAAGAGAGGTATCGTTTATCGGTTTCGAA 900
BSNT_02251___ 763 TTCCAAATGGACTGGACCGAATGCACGTATGCGCAAGTCATACGACACTC 812
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 901 TTCCAAATGGACTGGACCGAATGCACGTATGCGCAAGTCATACGACACTC 950
BSNT_02251___ 813 CAAACCGGTTCACCCAAAGCTCCAGTTCACAAGCCTGGATAAAATCATAT 862
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 951 CAAACCGGTTCACCCAAAGCTCCAGTTCACAAGCCTGGATAAAATCATAT 1000
BSNT_02251___ 863 TTGAAAAGAATAAAAAAACAAAAGAAGATTTTATTCAGTATATGATTGAA 912
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1001 TTGAAAAGAATAAAAAAACAAAAGAAGATTTTATTCAGTATATGATTGAA 1050
BSNT_02251___ 913 GTCAGTGACTACCTGCTCCCATTTCTGAAAAACCGGGCTGTCACCGTCAT 962
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1051 GTCAGTGACTACCTGCTCCCATTTCTGAAAAACCGGGCTGTCACCGTCAT 1100
BSNT_02251___ 963 CCGCTATCCGCATGGATCTAGGAGCGAATCATTTTTCCAAAAAAACAAAC 1012
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU13400___yk 1101 CCGCTATCCGCATGGATCTAGGAGCGAATCATTTTTCCAAAAAAACAAGC 1150
BSNT_02251___ 1013 CGGACTATGCGCCGGATTTTGTTCAATCTTTCTATGATGGAAGCCATGAA 1062
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU13400___yk 1151 CGGACTATGCGCCGGATTTTGTTCAGTCTTTCTATGATGGAAGCCATGAA 1200
BSNT_02251___ 1063 CATATTGTCTGTGAGGATATGTCTACATTGCTATGGCTTTGCAACCAGCT 1112
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1201 CATATTGTCTGTGAGGATATGTCTACATTGCTATGGCTTTGCAACCAGCT 1250
BSNT_02251___ 1113 TGCTTTGGAGTTTCACGTTCCTTTTCAAACCATTAAAAGCAGGCGTCCGG 1162
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1251 TGCTTTGGAGTTTCACGTTCCTTTTCAAACCATTAAAAGCAGGCGTCCGG 1300
BSNT_02251___ 1163 CTGAGATTGTCATTGATTTAGACCCGCCTTCGCGAGATGACTTTCTTATG 1212
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1301 CTGAGATTGTCATTGATTTAGACCCGCCTTCGCGAGATGACTTTCTTATG 1350
BSNT_02251___ 1213 GCCGTGCAGGCCGCAAATGAACTGAAGCGGCTGTTGGATTCCTTTGGCAT 1262
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1351 GCCGTGCAGGCCGCAAATGAACTGAAGCGGCTGTTGGATTCCTTTGGCAT 1400
BSNT_02251___ 1263 CACATCGTACCCGAAGCTGTCCGGCAACAAAGGCATCCAGCTTTATATTC 1312
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1401 CACATCGTACCCGAAGCTGTCCGGCAACAAAGGCATCCAGCTTTATATTC 1450
BSNT_02251___ 1313 CCTTGTCTCCCGAGGCATTTACGTATGAAGAAACACGCCAATTTACGCAG 1362
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1451 CCTTGTCTCCCGAGGCATTTACGTATGAAGAAACACGCCAATTTACGCAG 1500
BSNT_02251___ 1363 CTGATCGCAGAGTACTGCACCAATGCATTTCCCGAGCTCTTTACCACTGA 1412
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1501 CTGATCGCAGAGTACTGCACCAATGCATTTCCCGAGCTCTTTACCACTGA 1550
BSNT_02251___ 1413 ACGCTTGATTAAAAACAGACACGGCAAATTGTATCTTGATTATTTGCAGC 1462
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU13400___yk 1551 ACGCTTGATTAAAAACAGACACTGCAAATTGTATCTTGATTATTTGCAGC 1600
BSNT_02251___ 1463 ATGCAGAAGGAAAAACGATTATCTGTCCCTATTCGACGAGAGGAAATGAG 1512
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU13400___yk 1601 ATGCAGAAGGAAAAACGATTATCTGTCCCTATTCAACGAGAGGAAATGAG 1650
BSNT_02251___ 1513 CTTGGGACTGTTGCAGCCCCGCTCTACTGGCATGAGGTGCAATCATCTTT 1562
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1651 CTTGGGACTGTTGCAGCCCCGCTCTACTGGCATGAGGTGCAATCATCTTT 1700
BSNT_02251___ 1563 AACACCCGCTCTGTTTACAATTGATACGGTCATCGATCGAATTAAGAAGC 1612
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1701 AACACCCGCTCTGTTTACAATTGATACGGTCATCGATCGAATTAAGAAGC 1750
BSNT_02251___ 1613 AGGGCTGCCCATTTTTTGATTTTTACCGCAACCCGCAAGACGAACCGCTT 1662
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk 1751 AGGGCTGCCCATTTTTTGATTTTTACCGCAACCCGCAAGACGAACCGCTT 1800
BSNT_02251___ 1663 AGCGCCATATTGCATCAGTTGAAGAAAAAGAGCTGA 1698
|||||.||||||||||||||||||||||||||||||
BSU13400___yk 1801 AGCGCTATATTGCATCAGTTGAAGAAAAAGAGCTGA 1836
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