Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02251 and BSU13400

See Amino acid alignment / Visit BSNT_02251 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:51
# Commandline: needle
#    -asequence dna-align/BSNT_02251___ligD.1.22522.seq
#    -bsequence dna-align/BSU13400___ykoU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02251___ligD-BSU13400___ykoU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02251___ligD-BSU13400___ykoU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02251___ligD
# 2: BSU13400___ykoU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1836
# Identity:    1689/1836 (92.0%)
# Similarity:  1689/1836 (92.0%)
# Gaps:         138/1836 ( 7.5%)
# Score: 8409.0
# 
#
#=======================================

BSNT_02251___      0 --------------------------------------------------      0
                                                                       
BSU13400___yk      1 ATGGCGTTTACCATGCAGCCGGTCTTAACTTCGTCACCGCCAATCGGAGC     50

BSNT_02251___      0 --------------------------------------------------      0
                                                                       
BSU13400___yk     51 AGAATGGCGTTACGAAGTAAAATATGATGGGTACCGCTGTATTCTCCGCA    100

BSNT_02251___      1 --------------------------------------GTGGAGCTCAGC     12
                                                           ||||||||||||
BSU13400___yk    101 TCCATTCTTCAGGTGTGACCTTAACCAGCAGAAATGGTGTGGAGCTCAGC    150

BSNT_02251___     13 AGCACCTTCCCTGAAATCACACAATTCGCCAAAACTGCCTTTCAGCACCT     62
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    151 AGCACCTTCCCTGAAATCACACAATTCGCCAAAACTGCCTTTCAGCACCT    200

BSNT_02251___     63 AGAAAAAGAGCTTCCGCTGACACTTGACGGTGAAATCGTATGTTTGGTGA    112
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    201 AGAAAAAGAGCTTCCGCTGACACTTGACGGTGAAATCGTATGTTTGGTGA    250

BSNT_02251___    113 ATCCCTGTCGTGCAGATTTTGAACACCTTCAAGTGCGGGGGCGTTTGAAA    162
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    251 ATCCCTGTCGTGCAGATTTTGAACACCTTCAAGTGCGGGGGCGTTTGAAA    300

BSNT_02251___    163 AGGCCAGACAAGATTCAGGAATCGGCAAACGCGCGGCCGTGCTGCTTTCT    212
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    301 AGGCCAGACAAGATTCAGGAATCGGCAAACGCGCGGCCGTGCTGCTTTCT    350

BSNT_02251___    213 CGCCTTTGATTTGTTAGAGCGAAGCGGAGAAGATGTAACGCTTCTTTCGT    262
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    351 CGCCTTTGATTTGTTAGAGCGAAGCGGAGAAGATGTAACGCTTCTTTCGT    400

BSNT_02251___    263 ATTTGGACCGCAAAAAATCGCTGCGTGAACTCATATCCGCAGCAAAGCTT    312
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    401 ATTTGGACCGCAAAAAATCGCTGCGTGAACTCATATCCGCAGCAAAGCTT    450

BSNT_02251___    313 CCTGCATCTCCAGATCCTTACGCAAAAGAAACCATTCAATCCATTCCCTG    362
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    451 CCTGCATCTCCAGATCCTTACGCAAAAGAAACCATTCAATCCATTCCCTG    500

BSNT_02251___    363 TTATGATCATTTTGATCAACTCTGGGAGATGGTAATAAAATATGACGGAG    412
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    501 TTATGATCATTTTGATCAACTCTGGGAGATGGTAATAAAATATGACGGAG    550

BSNT_02251___    413 AAGGAATTGTAGCGAAGAAAACAAACAGCAAATGGCTTGAAAAGAAGCGG    462
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    551 AAGGAATTGTAGCGAAGAAAACAAACAGCAAATGGCTTGAAAAGAAGCGG    600

BSNT_02251___    463 TCGTCCGATTGGCTCAAATATAAAAACTTTAAACAAGCTTATGTTTGCAT    512
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    601 TCGTCCGATTGGCTCAAATATAAAAACTTTAAACAAGCTTATGTTTGCAT    650

BSNT_02251___    513 AACAGGGTTCAACCCTAACAACGGGTTTCTGACGGTATCGGTGTTAAAAA    562
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    651 AACAGGGTTCAACCCTAACAACGGGTTTCTGACGGTATCGGTGTTAAAAA    700

BSNT_02251___    563 ACGGAATAATGACACCGATTGCCTCTGTCTCGCACGGAATGCGCGATGAG    612
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU13400___yk    701 ACGGAATAATGACACCGATTGCCTCTGTCTCGCACGGAATGCGTGATGAG    750

BSNT_02251___    613 GAAAAAAGCGCTATACGCGAGATTATGGAACAGCACGGACATCAAACACC    662
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    751 GAAAAAAGCGCTATACGCGAGATTATGGAACAGCACGGACATCAAACACC    800

BSNT_02251___    663 CTCAGGCGAGTTTAAGCTTGAACCTTCGATTTGTGCAGCTGTTCAATACT    712
                     |||||||||.||||.|||||||||||||||||||||||||||||||||||
BSU13400___yk    801 CTCAGGCGAATTTACGCTTGAACCTTCGATTTGTGCAGCTGTTCAATACT    850

BSNT_02251___    713 TAACAATTCTCCATGGCACATTAAGAGAGGTATCGTTTATCGGTTTCGAA    762
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU13400___yk    851 TAACAATTCTCCAAGGCACATTAAGAGAGGTATCGTTTATCGGTTTCGAA    900

BSNT_02251___    763 TTCCAAATGGACTGGACCGAATGCACGTATGCGCAAGTCATACGACACTC    812
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    901 TTCCAAATGGACTGGACCGAATGCACGTATGCGCAAGTCATACGACACTC    950

BSNT_02251___    813 CAAACCGGTTCACCCAAAGCTCCAGTTCACAAGCCTGGATAAAATCATAT    862
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk    951 CAAACCGGTTCACCCAAAGCTCCAGTTCACAAGCCTGGATAAAATCATAT   1000

BSNT_02251___    863 TTGAAAAGAATAAAAAAACAAAAGAAGATTTTATTCAGTATATGATTGAA    912
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1001 TTGAAAAGAATAAAAAAACAAAAGAAGATTTTATTCAGTATATGATTGAA   1050

BSNT_02251___    913 GTCAGTGACTACCTGCTCCCATTTCTGAAAAACCGGGCTGTCACCGTCAT    962
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1051 GTCAGTGACTACCTGCTCCCATTTCTGAAAAACCGGGCTGTCACCGTCAT   1100

BSNT_02251___    963 CCGCTATCCGCATGGATCTAGGAGCGAATCATTTTTCCAAAAAAACAAAC   1012
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU13400___yk   1101 CCGCTATCCGCATGGATCTAGGAGCGAATCATTTTTCCAAAAAAACAAGC   1150

BSNT_02251___   1013 CGGACTATGCGCCGGATTTTGTTCAATCTTTCTATGATGGAAGCCATGAA   1062
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU13400___yk   1151 CGGACTATGCGCCGGATTTTGTTCAGTCTTTCTATGATGGAAGCCATGAA   1200

BSNT_02251___   1063 CATATTGTCTGTGAGGATATGTCTACATTGCTATGGCTTTGCAACCAGCT   1112
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1201 CATATTGTCTGTGAGGATATGTCTACATTGCTATGGCTTTGCAACCAGCT   1250

BSNT_02251___   1113 TGCTTTGGAGTTTCACGTTCCTTTTCAAACCATTAAAAGCAGGCGTCCGG   1162
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1251 TGCTTTGGAGTTTCACGTTCCTTTTCAAACCATTAAAAGCAGGCGTCCGG   1300

BSNT_02251___   1163 CTGAGATTGTCATTGATTTAGACCCGCCTTCGCGAGATGACTTTCTTATG   1212
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1301 CTGAGATTGTCATTGATTTAGACCCGCCTTCGCGAGATGACTTTCTTATG   1350

BSNT_02251___   1213 GCCGTGCAGGCCGCAAATGAACTGAAGCGGCTGTTGGATTCCTTTGGCAT   1262
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1351 GCCGTGCAGGCCGCAAATGAACTGAAGCGGCTGTTGGATTCCTTTGGCAT   1400

BSNT_02251___   1263 CACATCGTACCCGAAGCTGTCCGGCAACAAAGGCATCCAGCTTTATATTC   1312
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1401 CACATCGTACCCGAAGCTGTCCGGCAACAAAGGCATCCAGCTTTATATTC   1450

BSNT_02251___   1313 CCTTGTCTCCCGAGGCATTTACGTATGAAGAAACACGCCAATTTACGCAG   1362
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1451 CCTTGTCTCCCGAGGCATTTACGTATGAAGAAACACGCCAATTTACGCAG   1500

BSNT_02251___   1363 CTGATCGCAGAGTACTGCACCAATGCATTTCCCGAGCTCTTTACCACTGA   1412
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1501 CTGATCGCAGAGTACTGCACCAATGCATTTCCCGAGCTCTTTACCACTGA   1550

BSNT_02251___   1413 ACGCTTGATTAAAAACAGACACGGCAAATTGTATCTTGATTATTTGCAGC   1462
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU13400___yk   1551 ACGCTTGATTAAAAACAGACACTGCAAATTGTATCTTGATTATTTGCAGC   1600

BSNT_02251___   1463 ATGCAGAAGGAAAAACGATTATCTGTCCCTATTCGACGAGAGGAAATGAG   1512
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU13400___yk   1601 ATGCAGAAGGAAAAACGATTATCTGTCCCTATTCAACGAGAGGAAATGAG   1650

BSNT_02251___   1513 CTTGGGACTGTTGCAGCCCCGCTCTACTGGCATGAGGTGCAATCATCTTT   1562
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1651 CTTGGGACTGTTGCAGCCCCGCTCTACTGGCATGAGGTGCAATCATCTTT   1700

BSNT_02251___   1563 AACACCCGCTCTGTTTACAATTGATACGGTCATCGATCGAATTAAGAAGC   1612
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1701 AACACCCGCTCTGTTTACAATTGATACGGTCATCGATCGAATTAAGAAGC   1750

BSNT_02251___   1613 AGGGCTGCCCATTTTTTGATTTTTACCGCAACCCGCAAGACGAACCGCTT   1662
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13400___yk   1751 AGGGCTGCCCATTTTTTGATTTTTACCGCAACCCGCAAGACGAACCGCTT   1800

BSNT_02251___   1663 AGCGCCATATTGCATCAGTTGAAGAAAAAGAGCTGA   1698
                     |||||.||||||||||||||||||||||||||||||
BSU13400___yk   1801 AGCGCTATATTGCATCAGTTGAAGAAAAAGAGCTGA   1836


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